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Protein Overview: YPL060C-A

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run NOP9 No Comments Hazbun TR, et al. (2003)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..122] MSA 1.05099 View MSA. No confident structure predictions are available.
2 View Details [123..543] PSI-BLAST 45.69897 HIV RNase H (Domain of reverse transcriptase); HIV-1 reverse transcriptase
3 View Details [544..868] PSI-BLAST 43.30103 N-terminal Zn binding domain of HIV integrase; Retroviral integrase, catalytic domain
4 View Details [869..1007] MSA 1.37499 View MSA. No confident structure predictions are available.
5 View Details [1008..1104] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • nucleotidyltransferase activity
  • 2.08067737569595 bayes_pls_golite062009
  • DNA polymerase activity
  • 1.30231569478597 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
  • 1.29719382213292 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 1.19125536460488 bayes_pls_golite062009
  • ribonuclease activity
  • 0.969438660919194 bayes_pls_golite062009
  • binding
  • 0.681153419173075 bayes_pls_golite062009
  • transferase activity
  • 0.564818692007078 bayes_pls_golite062009
  • catalytic activity
  • 0.506386500680103 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 0.139403453656723 bayes_pls_golite062009
  • RNA polymerase activity
  • 0.139403453656723 bayes_pls_golite062009
  • nucleic acid binding
  • 0.0649376648268392 bayes_pls_golite062009
  • DNA binding
  • 0.0337904155200424 bayes_pls_golite062009
    3
    Term Confidence Notes
  • nuclease activity
  • 1.94987701094917 bayes_pls_golite062009
  • ribonuclease activity
  • 0.969438660919194 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 0.787213833707638 bayes_pls_golite062009
  • exonuclease activity
  • 0.738049151007118 bayes_pls_golite062009
  • catalytic activity
  • 0.709734459150736 bayes_pls_golite062009
  • 3'-5' exonuclease activity
  • 0.332143782945747 bayes_pls_golite062009
  • hydrolase activity
  • 0.301910249637397 bayes_pls_golite062009
  • binding
  • 0.205040227344888 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle