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Protein Overview: YOR088W

General Information:
Name(s) found: YOR088W [SGD]
Description(s) found:
Found 12 descriptions.
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  • YOR088W SGDID:S0005614, Chr XV from 488286-489734 [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 482 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMERMDSPK WLGSHNFYQG RFTGGSVIDL SFQPRKIKGA CIPKLFADDL LILFLGLYTL  60
   61 VVNGKDSERV QSFDLLESIF YVFNTGFILD ELTKLYYIGY AHLSFWNLFN DTTYLIITFA 120
  121 MGFRAMSVTP LNAKYSSEDW DKISYRVLSC AAPFVWSRLL LYLESQRFIG IMLVILKHMM 180
  181 KESIVFFFLL FLIMIGFTQG FLGLDSADGK RDITGPILGN LTITVLGLGS FDVFEEFAPP 240
  241 YAAILYYGYY FIVSVILLNI LIALYSTAYQ KVIDNADDEY MALMSQKTLR YIRAPDEDVY 300
  301 VSPLNLIEVF MTPIFRILPP KRAKDLSYTV MTIVYSPFLL LISVKETREA RRIKYNRMKR 360
  361 LNDDANEYDT PWDLTDGYLD DDDGLFSDNR NSGMRATQLK NSRSLKLQRT AEQEDVHFKV 420
  421 PKKWYKNVKK CSPSFEQYDN DDTEDDAGED KDEVKELTKK VENLTAVITD LLEKLDIKDK 480
  481 KE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] deduced N/A No confident structure predictions are available.
    2 View Details [73..265] Pfam 17.229148 Ion transport protein No confident structure predictions are available.
    3 View Details [266..380] MSA 2.334994 View MSA. No confident structure predictions are available.
    4 View Details [381..482] MSA 1.082997 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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