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Protein Overview: IRC10

General Information:
Name(s) found: IRC10 / YOL015W [SGD]
Description(s) found:
Found 24 descriptions.
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  • Putative protein of unknown function; null mutant displays increased levels of spontaneous Rad52p foci [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 586 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIEYSRLPG FESINISFSR GMLRLAKFTN FATYKQKLEY FRLLAGSNKY IQRISVADFE  60
   61 RHPDEINYIY IILISILQME ECMPVLVLCP TVYWVRFHWP GKCSVNSLNF TNETLKSAFH 120
  121 AVFTPYFALM KKVLGRIKNN MLLFAEPHAN LNNLFVKHFH DLIYKSVKDE KTGEAILYLR 180
  181 TNVNVPNVFI DDKRAVFHGD GMKIGKFTGK FLCFSFKRTI RWSKLDSVDS FAVTTVNYRV 240
  241 SVNWEKTPRK TFLSLDSDTK NLHYISKKIL NKKGKNATTS KTTKSSCTSE NVCDDKTFSV 300
  301 EFPLTTSAKT EYLLRSNFSL EKINESNNPT LQELTLNRTH RLYRSNFRNE QSTTQRKFEK 360
  361 IGRTVSTDSG NKLLTFPEQK ATRDSNPFSI ELTHATVISS DESALKDTTN QAIAEMQRIT 420
  421 PAIAKTISRR TANWVCSNPA PDPYGEPSTW SRILTPNLKI ISESSPYYPV HLASPNSTFS 480
  481 RDQSVRSVVM RRSSVCVEKQ NSFFRNYEHF KNILSRRTIK VKTSCPRLSV DVSDNKRENL 540
  541 SQEHLILPNK SREKVNRFKN CLHRVAEALR AAKENWDQHN PRNSIH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] MSA 2.003959 View MSA. No confident structure predictions are available.
    2 View Details [110..586] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle