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Protein Overview: YMR114C

General Information:
Name(s) found: YMR114C [SGD]
Description(s) found:
Found 25 descriptions.
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  • Protein of unknown function; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and cytoplasm; YMR114C is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    ribosome [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGRFALAYD SGDLPQLLRD WNLPVNTPKD ASSNSQHPHD EEDTKDQPTV SKDIFKASYN  60
   61 ISPTNYSAVY RPDTKAIQFM RWGLVPFWTK DVSQFKTYRT FNARLENLQE SKMWMRPCEK 120
  121 KRCAVLMSGY FEWKTVGKKK TPYFISRRDG RLMFVAGMYD YVEKDDLYTF TIITAQGPRE 180
  181 LEWLHERMPC VLEPGTESWD AWMDVDKTTW STEELVKLLK PDYDESKLQF YQVTDDVGKT 240
  241 TNTGERLIKP LLKEDSDMFS VKREKEEALL ENDNEQGIDN RGVKGDKSLK GEDVFNQKKS 300
  301 LKRNSYDGLK KNEEQEETTL PEEGSIGDRV KREEANLSPK REGNREKRNI VNMLGNQKDS 360
  361 RGKKKIKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen UBC12 YMR114C 1 Unpublished Fields Lab Data
    View Screen SPT21 YMR114C 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YMR114C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..254] Pfam 183.387216 Uncharacterised ACR, COG2135 No confident structure predictions are available.
    2 View Details [255..368] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle