Protein Overview: YMR090W

General Information:
Name(s) found:	YMR090W [SGD]
Description(s) found: SHOW ONLY BEST	gi\|807973\|emb\|CAA89237.1\| unknown [Saccharomyces cerevisiae] [NCBI NR] gi\|6323737\|ref\|NP_013808.1\| Putative protein of unknown function with similarity to DTDP-glucose 4,6-dehydratases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YMR090W is not an essential gene; Ymr090wp [Saccharomyces cerevis [NCBI NR] gi\|2497145\|sp\|Q04304.1\|YMY0_YEAST RecName: Full=UPF0659 protein YMR090W [NCBI NR] pir\|\|S54466 hypothetical protein YMR090w - yeast (Saccharomyces cerevisiae) [NCBI NR] UPF0659 protein YMR090W OS=Saccharomyces cerevisiae GN=YMR090W PE=1 SV=1 [Swiss-Prot] Protein of unknown function localised to cytoplasm [mips] Putative protein of unknown function with similarity to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability [SGD] YMR090W, Chr XIII from 449244-449927 [yeast_orfs2] Chr XIII from 449244-449927 [yeastorf3.fasta] (Q04304) Hypothetical 24.9 kDa protein in RCA1-NPL6 intergenic region [4932.FASTACCERV.txt] YMR090W SGDID:S0004696, Chr XIII from 449244-449927, Uncharacterized ORF [yeastflysequest.fasta] Ymr090wp [Saccharomyces cerevisiae]gi\|807973\|emb\|CAA89237.1\| unknown [Saccharomyces cerevisiae]gi\|2497145\|sp\|Q04304\|YMY0_YEAST Hypothetical 24.9 kDa protein in RCA1-NPL6 intergenic regiongi\|1078590\|pir\|\|S54466 hypothetical protein YMR090w - yeast (Sacc [nrdb_11152004_Chlamydomonas] YMR090W SGDID:S000004696, Chr XIII from 449244-449927, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta] YMR090W SGDID:S000004696, Chr XIII from 449244-449927, Uncharacterized ORF, "Putative protein of unknown function with similarity to DTDP-glucose 4,6-dehydratases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YMR090W is not a [yeast-contam.fasta] YMR090W SGDID:S000004696, Chr XIII from 449244-449927, Uncharacterized ORF, "Putative protein of unknown function with similarity to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide ma [yeast-200209-contam.fasta] unknown [Saccharomyces cerevisiae] [nr-271106-contam.fasta] Hypothetical 24.9 kDa protein in RCA1-NPL6 intergenic region [nr-271106-contam.fasta] Putative protein of unknown function with similarity to DTDP-glucose 4,6-dehydratases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YMR090W is not an essential gene; Ymr090wp [Saccharomyces cerevisiae] [nr-271106-contam.fasta] YMR090W SGDID:S000004696, Chr XIII from 449244-449927, Uncharacterized ORF, "Putative protein of unknown function with similarity to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability" [yeast-bovrabprots.fasta] YMR090W SGDID:S000004696, Chr XIII from 449244-449927, Uncharacterized ORF, "Putative protein of unknown function with similarity to DTDP-glucose 4,6-dehydratases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YMR090W is not an essential gene" [yeast-contam_custom.fasta] [chemostatdb.fasta] UPF0659 protein YMR090W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR090W PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta] YMR090W SGDID:S000004696, Chr XIII from 449245-449928, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function with similarity to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability" [yeast-030211-contam.fasta] YMR090W SGDID:S000004696, Chr XIII from 449245-449928, Genome Release 64-2-1, Uncharacterized ORF, "Putative protein of unknown function; similar to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability" [20141208_orf_trans.fasta] TR8901\|c0_g1_i1\|g.6183 ORF TR8901\|c0_g1_i1\|g.6183 TR8901\|c0_g1_i1\|m.6183 type:complete len:228 (+) TR8901\|c0_g1_i1:810-1493(+) [Y12_S_cerevisiae-Sep2015-contam.fasta] TR8393\|c0_g1_i1\|g.5981 ORF TR8393\|c0_g1_i1\|g.5981 TR8393\|c0_g1_i1\|m.5981 type:complete len:228 (+) TR8393\|c0_g1_i1:950-1633(+) [DBVPG6044_S_cerevisiae-Sep2015-contam.fasta] asmbl_4365\|g.2756 ORF asmbl_4365\|g.2756 asmbl_4365\|m.2756 type:complete len:228 (+) asmbl_4365:949-1632(+) [DBVPG6044_Trinity_v2_2_0_PASA_6May2016-contam.fasta] asmbl_4358\|g.2815 ORF asmbl_4358\|g.2815 asmbl_4358\|m.2815 type:complete len:228 (+) asmbl_4358:941-1624(+) [Y12_Trinity_v2_2_0_PASA_6May2016-contam.fasta] ID=asmbl_4365\|g.2586 ORF ID=asmbl_4365\|g.2586 ID=asmbl_4365\|m.2586 type:complete len:228 (+) ID=asmbl_4365:949-1632(+) [DBVPG6044_quiverGenomes_Trinity_v2_2_0_PASA_2June2016-contam.fasta] ID=asmbl_4363\|g.2526 ORF ID=asmbl_4363\|g.2526 ID=asmbl_4363\|m.2526 type:complete len:228 (+) ID=asmbl_4363:941-1624(+) [Y12_quiver_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
Organism:	Saccharomyces cerevisiae
Length:	227 amino acids
Gene Ontology:
Cellular Component:	cytoplasm [IDA]
Biological Process:	biological_process [ND]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPMKVAVVG ASGKVGRLLI NQLKANDSFS TPLAIVRTQD QVNYFKNEVG VDASLTDIEN  60
   61 ASVSEITDAI KAYDAVVFSA GAGGKGMERI FTVDLDGCIK VVEACEKAGI KRFVVVSALK 120
  121 AEDRDFWYNI KGLREYYIAK RSADREVRNS NLDYTILQPG SLELNKGTGL LQPLDKLEEK 180
  181 ASVNYSINRE DVASFIVESL LHPNATVKKT ISLVNGNEPM EKFIQSL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

	PROTEIN(S)	PUBLICATION
View Data	YMR090W	Huh WK, et al. (2003)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..227]	PSI-BLAST	69.39794	dTDP-glucose 4,6-dehydratase (RmlB)

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Protein Overview: YMR090W

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: