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Protein Overview: YLR460C

General Information:
Name(s) found: YLR460C [SGD]
Description(s) found:
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  • gi|717077|gb|AAB64723.1| Ylr460cp [Saccharomyces cerevisiae] [NCBI NR]
  • gi|6323493|ref|NP_013565.1| Putative protein of unknown function, possibly up-regulated by iodine; Ylr460cp [Saccharomyces cerevisiae] [NCBI NR]
  • gi|1730591|sp|P54007.1|YL460_YEAST RecName: Full=Uncharacterized protein YLR460C [NCBI NR]
  • pir||S59418 hypothetical protein YLR460c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • (P54007) Hypothetical 41.1 kDa protein ON CDC91-PAU4 intergenic region [Swiss-Prot]
  • Uncharacterized protein YLR460C OS=Saccharomyces cerevisiae GN=YLR460C PE=1 SV=1 [Swiss-Prot]
  • Protein of unknown function [mips]
  • Member of the quinone oxidoreductase family, up-regulated in response to the fungicide mancozeb; possibly up-regulated by iodine [SGD]
  • YLR460C, Chr XII from 1059753-1060883, reverse complement [yeast_orfs2]
  • Chr XII from 1059753-1060883, reverse complement [yeastorf3.fasta]
  • Chr XII from 1060883-1059753, reverse complement [yeastorf5.fasta]
  • YLR460C SGDID:S0004452, Chr XII from 1060884-1059754, reverse complement, Uncharacterized ORF [yeastflysequest.fasta]
  • Ylr460cp [Saccharomyces cerevisiae]gi|1730591|sp|P54007|YL60_YEAST Hypothetical 41.1 kDa protein ON CDC91-PAU4 intergenic regiongi|1363734|pir||S59418 hypothetical protein YLR460c - yeast (Saccharomyces cerevisiae)gi|717077|gb|AAB64723.1| Ylr460cp [Sac [nrdb_11152004_Chlamydomonas]
  • YLR460C SGDID:S000004452, Chr XII from 1060884-1059754, reverse complement, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YLR460C SGDID:S000004452, Chr XII from 1060885-1059755, reverse complement, Uncharacterized ORF, "Hypothetical protein" [yeast-contam.fasta]
  • YLR460C SGDID:S000004452, Chr XII from 1060885-1059755, reverse complement, Uncharacterized ORF, "Putative protein of unknown function, possibly up-regulated by iodine" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • YLR460C SGDID:S000004452, Chr XII from 1060885-1059755, reverse complement, Uncharacterized ORF, "Member of the quinone oxidoreductase family, up-regulated in response to the fungicide mancozeb; possibly up-regulated by iodine" [yeast-200209-contam.fasta]
  • Ylr460cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • hypothetical protein; Ylr460cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Uncharacterized protein YLR460C [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Uncharacterized protein YLR460C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR460C PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YLR460C SGDID:S000004452, Chr XII from 1060887-1059757, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Member of the quinone oxidoreductase family, up-regulated in response to the fungicide mancozeb; possibly up-regulated by iodine" [yeast-030211-contam.fasta]
  • YLR460C SGDID:S000004452, Chr XII from 1060887-1059757, Genome Release 64-2-1, reverse complement, Uncharacterized ORF, "Member of the quinone oxidoreductase family; up-regulated in response to the fungicide mancozeb; possibly up-regulated by iodine" [20141208_orf_trans.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 376 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVAIPETMK AVVIEDGKAV VKEGIPIPEL EEGFVLIKTL AVAGNPTDWA HIDYKIGPQG  60
   61 SILGCDAAGQ IVKLGPAVNP KDFSIGDYIY GFIHGSSVRF PSNGAFAEYS AISTVVAYKS 120
  121 PNELKFLGED VLPAGPVRSL EGVATIPVSL TTAGLVLTYN LGLDLKWEPS TPQRKGPILL 180
  181 WGGATAVGQS LIQLANKLNG FTKIIVVASR KHEKLLKEYG ADELFDYHDI DVVEQIKHKY 240
  241 NNISYLVDCV ANQDTLQQVY KCAADKQDAT IVELKNLTEE NVKKENRRQN VTIDIIRLYS 300
  301 IGGHEVPFGN ITLPADSEAR KAAIKFIKFI NPKINDGQIR HIPVRVYKNG LCDVPHILKD 360
  361 IKYGKNSGEK LVAVLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159]
    [304..376]    		 PSI-BLAST 113.0 Alcohol dehydrogenase
    2 View Details [160..303] PSI-BLAST 113.0 Alcohol dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  4.14217990101505 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  2.13774251017711 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.96417104841008 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  1.68027744358887 bayes_pls_golite062009
  • chaperone binding
    		•  0.983752799796442 bayes_pls_golite062009
  • alcohol dehydrogenase activity, zinc-dependent
    		•  0.839863523675468 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.527946013169731 bayes_pls_golite062009
  • binding
    		•  0.429102711245135 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle