YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: YIR043C

General Information:
Name(s) found: YIR043C [SGD]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • Possible pseudogene in strain S288C; YIR043C and the adjacent ORF, YIR044C, together may encode a non-functional member of the conserved, often subtelomerically-encoded Cos protein family [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 230 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCQEAFRTT LLEPFSLKKD EAAKVKSFKD SVSYIEEALG VYFTEVEKQW KLFNTEKSWS  60
   61 PVGLEDAKLP KEAYRFKLTW ILKRIFKLRC LQVFLYYFLI VYTSGNVDLI SRFLFPVVMF 120
  121 FIMTRDFQNM GMIVLSVKME HKMQFLSTII NEQESGANGW DEIAKKMNRY LFEKKVWNNE 180
  181 EFFYDGLDCE WFFSCFFYRL LSLKKTMWFA SLNVELWPYV KEAQSVVTSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..64] deduced N/A No confident structure predictions are available.
    2 View Details [65..230] Pfam 55.585027 DUP family No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle