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View Structure Prediction Details

Protein: YIR043C
Organism: Saccharomyces cerevisiae
Length: 230 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIR043C.

Description E-value Query
Range
Subject
Range
YIW3_YEAST - Putative uncharacterized protein YIR043C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
YIR043C - Possible pseudogene in strain S288C; YIR043C and the adjacent ORF, YIR044C, together may encode a no...
1.0E-90 [1..230] [87..316]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
6.0E-90 [1..230] [1..230]

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Predicted Domain #1
Region A:
Residues: [1-64]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCQEAFRTT LLEPFSLKKD EAAKVKSFKD SVSYIEEALG VYFTEVEKQW KLFNTEKSWS  60
   61 PVGL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [65-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDAKLPKEAY RFKLTWILKR IFKLRCLQVF LYYFLIVYTS GNVDLISRFL FPVVMFFIMT  60
   61 RDFQNMGMIV LSVKMEHKMQ FLSTIINEQE SGANGWDEIA KKMNRYLFEK KVWNNEEFFY 120
  121 DGLDCEWFFS CFFYRLLSLK KTMWFASLNV ELWPYVKEAQ SVVTSL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 55.585027
Match: PF00674
Description: DUP family

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle