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Protein Overview: RTT102

General Information:
Name(s) found: RTT102 / YGR275W [SGD]
Description(s) found:
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  • gi|45270654|gb|AAS56708.1| YGR275W [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S64608 hypothetical protein YGR275w - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|2104898|emb|CAA58897.1| PIC186 protein [Saccharomyces cerevisiae] [NCBI NR]
  • sp|P53330|YG5R_YEAST Hypothetical 21.1 kDa protein in TAF145-YOR1 intergenic region [NCBI NR]
  • gi|1323501|emb|CAA97305.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • (P53330) Hypothetical 21.1 kDa protein in TAF145-YOR1 intergenic region [Swiss-Prot]
  • RTT102 - Regulator of Ty1 Transposition [mips]
  • Component of both the SWI/SNF and RSC chromatin remodeling complexes, suggested role in chromosome maintenance; possible weak regulator of Ty1 transposition [SGD]
  • RTT102, Chr VII from 1043186-1043746 [yeast_orfs2]
  • Chr VII from 1043186-1043746 [yeastorf3.fasta]
  • Chr VII from 1043193-1043753 [yeastorf4.fasta]
  • unnamed protein product [Saccharomyces cerevisiae]gi|2104898|emb|CAA58897.1| PIC186 protein [Saccharomyces cerevisiae]gi|45270654|gb|AAS56708.1| YGR275W [Saccharomyces cerevisiae]gi|2131715|pir||S64608 hypothetical protein YGR275w - yeast (Saccharomyce [nrdb_11152004_Chlamydomonas]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • YGR275W [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • PIC186 protein [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 186 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    SWI/SNF complex [IPILink to PubMed article]
    RSC complex [IPILink to PubMed articleLink to PubMed article]
    Biological Process: chromatin remodeling [IPILink to PubMed article]
    chromosome segregation [IGILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSTSLLMN KAIKPNVGKK ELRQQEIEKM DPQTLITKAN KVSYYGNPTS KESWRYDWYQ  60
   61 PSKVSSNVQQ PQQQLGDMEN NLEKYPFRYK TWLRNQEDEK NLQRESCEDI LDLKEFDRRI 120
  121 LKKSLMTSHT KGDTSKATGA PSANQGDEAL SVDDIRGAVG NSEAIPGLSA GVNNDNTKES 180
  181 KDVKMN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run NAF1 No Comments Hazbun TR, et al. (2003)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] Pfam 93.267606 No description for PF09510.1 was found. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle