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Protein Overview: YGL039W

General Information:
Name(s) found: YGL039W [SGD]
Description(s) found:
Found 26 descriptions.
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  • Oxidoreductase shown to reduce carbonyl compounds to chiral alcohols [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 348 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: telomere maintenance [IMPLink to PubMed article]
    Molecular Function: oxidoreductase activity [IDALink to PubMed article]
    dihydrokaempferol 4-reductase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTEKTVVFV SGATGFIALH VVDDLLKTGY KVIGSGRSQE KNDGLLKKFK SNPNLSMEIV  60
   61 EDIAAPNAFD KVFQKHGKEI KVVLHIASPV HFNTTDFEKD LLIPAVNGTK SILEAIKNYA 120
  121 ADTVEKVVIT SSVAALASPG DMKDTSFVVN EESWNKDTWE SCQANAVSAY CGSKKFAEKT 180
  181 AWDFLEENQS SIKFTLSTIN PGFVFGPQLF ADSLRNGINS SSAIIANLVS YKLGDNFYNY 240
  241 SGPFIDVRDV SKAHLLAFEK PECAGQRLFL CEDMFCSQEA LDILNEEFPQ LKGKIATGEP 300
  301 GSGSTFLTKN CCKCDNRKTK NLLGFQFNKF RDCIVDTASQ LLEVQSKS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) AVO2 PMU1 YER064C YGL039W YTA12
    View Details Gavin AC, et al. (2006) OLA1 SLM3 YGL039W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YGL039W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89]
    [100..131]
    [174..199]
    [250..266]    		 PSI-BLAST 104.0 dTDP-glucose 4,6-dehydratase (RmlB)
    2 View Details [90..99]
    [132..173]
    [200..210]
    [235..249]
    [267..277]
    [305..335]    		 PSI-BLAST 104.0 dTDP-glucose 4,6-dehydratase (RmlB)
    3 View Details [211..234]
    [278..304]
    [336..348]    		 PSI-BLAST 104.0 dTDP-glucose 4,6-dehydratase (RmlB)


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle