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Protein Overview: YFR039C

General Information:
Name(s) found: YFR039C [SGD]
Description(s) found:
Found 25 descriptions.
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  • Putative protein of unknown function; may be involved in response to high salt and changes in carbon source; deletion mutant has decreased spore survival in Drosophila feces [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 510 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAVFKVTTA LLACVFIARY LVCQQNGLGS FATDLQPICR HTEFSVGSLF DSKLVEGSAV  60
   61 SDYLVGKYSQ SIKPLIERYP NSSLKRIMGY FYRFWYNIFS FLRLNELCCS LHSKLGPLLN 120
  121 HLRIAWYYLK PYTDNVKNVL ENPFNSSTDW MKYGSFSADG TLTKPIFETD SETEDYEDDE 180
  181 NENEDEDEDE DEDDVGIEDE NKEYEFDGVQ DGHGNSQLVT AAILQDLSKI IIGSNSHAEL 240
  241 ETYEAESLKM EYEAWIKAID SKIHSAMALL DSEIQSVFEA EVQNKSIEIT RNLDDLNTTV 300
  301 NEQLVFLDSK IKDINCTSKF DPVQNKIKYF DESGQVELEA YITKSSITSI LKNYKIHLLD 360
  361 FEKSLFHSLD SFLTEMAKLA ESIRLENVEV YEEWGDVMIS QWSQRMAYMD VRGLHLEDQY 420
  421 DPAYIEENHS NWLRFMELKK KVISERNRLV KHDLDMTLIL EWITKLKADF QNTKNNIQDT 480
  481 FLQRMNTADT LFKNRELKEQ LEEEFVRQEH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) LST8 YFR039C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen LSM8 YFR039C 1 Unpublished Fields Lab Data
    View Screen RAD51 YFR039C 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YFR039C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..234] deduced N/A No confident structure predictions are available.
    2 View Details [235..446] ORFEUS 8.07 Anthrax toxin lethal factor, N- and C-terminal domains; Anthrax toxin lethal factor, middle domain
    3 View Details [447..510] ORFEUS 8.07 Anthrax toxin lethal factor, N- and C-terminal domains; Anthrax toxin lethal factor, middle domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  0.0794943241122666 bayes_pls_golite062009
  • catalytic activity
    		•  0.0773439754635474 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle