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View Structure Prediction Details

Protein: YFR039C
Organism: Saccharomyces cerevisiae
Length: 510 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YFR039C.

Description E-value Query
Range
Subject
Range
OSW7_YEAST - Outer spore wall protein 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OSW7 PE=1 SV=...
YFR039C - Putative protein of unknown function; may be involved in response to high salt and changes in carbon...
0.0 [1..510] [1..510]
gi|1209835 - gi|1209835|gb|AAB07828.1| repeat motif-containing gene [Borrelia burgdorferi]
gi|1209835|gb|AA... - repeat motif-containing gene [Borrelia burgdorferi]
0.009 [200..389] [2..181]

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Predicted Domain #1
Region A:
Residues: [1-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAVFKVTTA LLACVFIARY LVCQQNGLGS FATDLQPICR HTEFSVGSLF DSKLVEGSAV  60
   61 SDYLVGKYSQ SIKPLIERYP NSSLKRIMGY FYRFWYNIFS FLRLNELCCS LHSKLGPLLN 120
  121 HLRIAWYYLK PYTDNVKNVL ENPFNSSTDW MKYGSFSADG TLTKPIFETD SETEDYEDDE 180
  181 NENEDEDEDE DEDDVGIEDE NKEYEFDGVQ DGHGNSQLVT AAILQDLSKI IIGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [235-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSHAELETYE AESLKMEYEA WIKAIDSKIH SAMALLDSEI QSVFEAEVQN KSIEITRNLD  60
   61 DLNTTVNEQL VFLDSKIKDI NCTSKFDPVQ NKIKYFDESG QVELEAYITK SSITSILKNY 120
  121 KIHLLDFEKS LFHSLDSFLT EMAKLAESIR LENVEVYEEW GDVMISQWSQ RMAYMDVRGL 180
  181 HLEDQYDPAY IEENHSNWLR FMELKKKVIS ER

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.07
Match: 1jkyA
Description: Anthrax toxin lethal factor, N- and C-terminal domains; Anthrax toxin lethal factor, middle domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 0.0794943241122666 bayes_pls_golite062009
catalytic activity 0.0773439754635474 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [447-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRLVKHDLDM TLILEWITKL KADFQNTKNN IQDTFLQRMN TADTLFKNRE LKEQLEEEFV  60
   61 RQEH

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.07
Match: 1jkyA
Description: Anthrax toxin lethal factor, N- and C-terminal domains; Anthrax toxin lethal factor, middle domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle