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Protein Overview: YEL077C

General Information:
Name(s) found: YEL077C [SGD]
Description(s) found:
Found 19 descriptions.
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  • Helicase-like protein encoded within the telomeric Y' element [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 1277 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: helicase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLGNSYDAF NHDPWMDVVG FEDPNQVTNR DISRIVLYSY MFLNTAKGCL VEYATFRQYM  60
   61 RELPKNAPQK LNFREMRQGL IALGRHCVGS RFETDLYESA TSELMANHSV QTGRNIYGVD 120
  121 SFSLTSVSGT TATLLQERAS ERWIQWLGLE SDYHCSFSST RNAEDVVAGE AASSDHHQKI 180
  181 SRVTRKRPRE PKSTNDILVA GQKLFGSSFE FRDLHQLRLC YEIYMADTPS VAVQAPPGYG 240
  241 KTELFHLPLI ALASKGDVKY VSFLFVPYTV LLANCMIRLG RCGCLNVAPV RNFIEEGYDG 300
  301 VTDLYVGIYD DLASTNFTDR IAAWENIVEC TFRTNNVKLG YLIVDEFHNF ETEVYRQSQF 360
  361 GGITNLDFDA FEKAIFLSGT APEAVADAAL QRIGLTGLAK KSMDINELKR SEDLSRGLSS 420
  421 YPTRMFNLIK EKSEVPLGHV HKIRKKVESQ PEEALKLLLA LFESEPESKA IVVASTTNEV 480
  481 EELACSWRKY FRVVWIHGKL DAAEKVSRTK EFVTDGNMRV LIGTKLVTEG IDIKQLMMVI 540
  541 MLDNRLNIIE LIQGVGRLRD GGLCYLLSRK NSWAARNRKG ELPPIKEGCI TEQVREFYGL 600
  601 ESKKGKKGQH VGCCGSRTDL SADTVELIER MDRLAEKQAT ASMSIVALPS NFQESNSSDR 660
  661 YRKYCSSDED SNTCIHGSAN ASTNASTNAI TTASTNVRTN ATTNASTNAT TNASTNATTN 720
  721 SSTNATTTAS TNVRTSATTT ASINVRTSAT TTESTNSSTN ATTTASINVR TSATTTKSIN 780
  781 SSTNATITES TNSNTNATTT ESTNSKTSAT TTASTNSNTS ATTTESTNSK TSATTTASTN 840
  841 SNTSATTTES TNSNTSATTT ASTNSSTNAT TTESTNASAK EDANKDGNAE DNRFHPVTDI 900
  901 NKESYKRKGS QMVLLERKKL KAQFPNTSEN MNVLQFLGFR SDEIKHLFLY GIDIYFCPEG 960
  961 VFTQYGLCKG CQKMFELCVC WAGQKVSYRR MAWEALAVER MLRNDEEYKE YLEDIEPYHG1020
 1021 DPVGYLKYFS VKRREIYSQI QRNYAWYLAI TRRRETISVL DSTRGKQGSQ VFRMSGRQIK1080
 1081 ELYYKVWSNL RESKTEVLQY FLNWDEKKCQ EEWEAKDDTV FVEALEKVGV FQRLRSMTSA1140
 1141 GLQGPQYVKL QFSRHHRQLR SRYELSLGMH LRDQIALGVT PSKVPHWTAF LSMLIGLFYN1200
 1201 KTFRQKLEYL LEQISEVWLL PHWLDLANVE VLAADNTKVP LYMLMVAVHK ELDSDDVPDG1260
 1261 RFDIILLCRD SSREVGE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RLF2 phosphorylation data - cascade search Green EM, et al (2005)
    View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] MSA 2.115994 View MSA. No confident structure predictions are available.
    2 View Details [113..611] PSI-BLAST 168.0 Initiation factor 4a
    3 View Details [612..677] deduced N/A No confident structure predictions are available.
    4 View Details [678..907] ab initio 13.79 No description for 1ldvA was found.
    5 View Details [908..1277] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle