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Protein Overview: HIM1

General Information:
Name(s) found: HIM1 / YDR317W [SGD]
Description(s) found:
Found 26 descriptions.
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  • Protein of unknown function involved in DNA repair [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 414 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: DNA repair [IGILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSVNTFTD YVLLFGSSSL VGKGILENLL DINLYIKNVS DLQGKLDSLS EIKGNVVLNK  60
   61 HVFCVNRRCI NEEKSFMKTI DYINMRSVTW QGGRYYLRSR KEKDTEKVPS SPNTFCYDNF 120
  121 EEGFIKNTPE ERGKDGYSFV YNQKQFSYTL HYACGKEKGI EIICNFTVTQ LIIPRSETWP 180
  181 KLLPRIFSGT QKLEKFDIDN KNYVPGRSLP SLCDISTMVC SLGSTSARVR RTQVPSSFAD 240
  241 YYLPFNLAQE FTNTTNKRLV VTTAFNNDFL SKTFEYFRIK AKLENDLDEA LPNKLKELVI 300
  301 LRPGPMCGQH GNPINVELGK ENSTFLEKIF YYPHYLLVYK KKYISEARRI GLRTKLSEII 360
  361 ASSIYRMPGS ALLGYAVPVS KVSYVASLMA IERKSKEAGP KLEVISSYQI DMIV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..414] deduced N/A No confident structure predictions are available.
    2 View Details [139..414] FFAS03 2.82 Crystal structure of Tat-interacting protein 30 kDa (HIV-1 tat interactive protein 2, 30 kDa homolog) (Human) (16924205) from Mus musculus at 2.30 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.65938032155125 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle