| Protein: | HIM1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 414 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HIM1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..414] | [1..414] |
|
Region A: Residues: [1-414] |
1 11 21 31 41 51
| | | | | |
1 MSYSVNTFTD YVLLFGSSSL VGKGILENLL DINLYIKNVS DLQGKLDSLS EIKGNVVLNK 60
61 HVFCVNRRCI NEEKSFMKTI DYINMRSVTW QGGRYYLRSR KEKDTEKVPS SPNTFCYDNF 120
121 EEGFIKNTPE ERGKDGYSFV YNQKQFSYTL HYACGKEKGI EIICNFTVTQ LIIPRSETWP 180
181 KLLPRIFSGT QKLEKFDIDN KNYVPGRSLP SLCDISTMVC SLGSTSARVR RTQVPSSFAD 240
241 YYLPFNLAQE FTNTTNKRLV VTTAFNNDFL SKTFEYFRIK AKLENDLDEA LPNKLKELVI 300
301 LRPGPMCGQH GNPINVELGK ENSTFLEKIF YYPHYLLVYK KKYISEARRI GLRTKLSEII 360
361 ASSIYRMPGS ALLGYAVPVS KVSYVASLMA IERKSKEAGP KLEVISSYQI DMIV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-414] |
1 11 21 31 41 51
| | | | | |
1 FVYNQKQFSY TLHYACGKEK GIEIICNFTV TQLIIPRSET WPKLLPRIFS GTQKLEKFDI 60
61 DNKNYVPGRS LPSLCDISTM VCSLGSTSAR VRRTQVPSSF ADYYLPFNLA QEFTNTTNKR 120
121 LVVTTAFNND FLSKTFEYFR IKAKLENDLD EALPNKLKEL VILRPGPMCG QHGNPINVEL 180
181 GKENSTFLEK IFYYPHYLLV YKKKYISEAR RIGLRTKLSE IIASSIYRMP GSALLGYAVP 240
241 VSKVSYVASL MAIERKSKEA GPKLEVISSY QIDMIV
|
| Detection Method: | |
| Confidence: | 2.82 |
| Match: | 2fmuA |
| Description: | Crystal structure of Tat-interacting protein 30 kDa (HIV-1 tat interactive protein 2, 30 kDa homolog) (Human) (16924205) from Mus musculus at 2.30 A resolution |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.65938032155125 | bayes_pls_golite062009 |
