Protein Overview: YDL129W

General Information:
Name(s) found:	YDL129W [SGD]
Description(s) found: SHOW ONLY BEST	gi\|74583644\|sp\|Q07555.1\|YD129_YEAST RecName: Full=Uncharacterized protein YDL129W [NCBI NR] gi\|6320074\|ref\|NP_010154.1\| Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YDL129W is not an essential gene; Ydl129wp [Saccharomyces cerevisiae] [NCBI NR] pir\|\|S67672 hypothetical protein YDL129w - yeast (Saccharomyces cerevisiae) [NCBI NR] gi\|1431195\|emb\|CAA98697.1\| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR] Uncharacterized protein YDL129W OS=Saccharomyces cerevisiae GN=YDL129W PE=1 SV=1 [Swiss-Prot] Protein of unknown function localised to cytoplasm and nucleus [mips] Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YDL129W is not an essential gene [SGD] YDL129W, Chr IV from 231024-231899 [yeast_orfs2] Chr IV from 231024-231899 [yeastorf3.fasta] >Q07555 (Q07555) Chromosome IV reading frame ORF YDL129W [4932.FASTACCERV.txt] YDL129W SGDID:S0002287, Chr IV from 231024-231899, Uncharacterized ORF [yeastflysequest.fasta] Ydl129wp [Saccharomyces cerevisiae]gi\|1431195\|emb\|CAA98697.1\| unnamed protein product [Saccharomyces cerevisiae]gi\|2131344\|pir\|\|S67672 hypothetical protein YDL129w - yeast (Saccharomyces cerevisiae) [nrdb_11152004_Chlamydomonas] (Q07555) S.cerevisiae chromosome IV reading frame ORF YDL129w [cerv4932.FASTAC] YDL129W SGDID:S000002287, Chr IV from 231024-231899, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta] YDL129W SGDID:S000002287, Chr IV from 231024-231899, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YDL129W is not an essential gene" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta] Uncharacterized protein YDL129W [nr-271106-contam.fasta] hypothetical protein; Ydl129wp [Saccharomyces cerevisiae] [nr-271106-contam.fasta] unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta] [chemostatdb.fasta] Uncharacterized protein YDL129W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL129W PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta] YDL129W SGDID:S000002287, Chr IV from 231024-231899, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YDL129W is not an essential gene" [yeast-030211-contam.fasta] YDL129W SGDID:S000002287, Chr IV from 231024-231899, Genome Release 64-2-1, Verified ORF, "Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YDL129W is not an essential gene; relative distribution to the nucleus increases upon DNA replication stress" [20141208_orf_trans.fasta] TR1734\|c0_g1_i1\|g.1260 ORF TR1734\|c0_g1_i1\|g.1260 TR1734\|c0_g1_i1\|m.1260 type:complete len:292 (+) TR1734\|c0_g1_i1:153-1028(+) [Y12_S_cerevisiae-Sep2015-contam.fasta] asmbl_692\|g.793 ORF asmbl_692\|g.793 asmbl_692\|m.793 type:complete len:292 (+) asmbl_692:188-1063(+) [Y12_Trinity_v2_2_0_PASA_6May2016-contam.fasta] ID=asmbl_696\|g.113 ORF ID=asmbl_696\|g.113 ID=asmbl_696\|m.113 type:complete len:292 (+) ID=asmbl_696:188-1063(+) [Y12_quiver_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
Organism:	Saccharomyces cerevisiae
Length:	291 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cytoplasm [IDA ]
Biological Process:	biological_process [ND]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRSRRSAE AYLVTPEEPA KNKSERSIES NERVGTREAK SENTSVFSPA YSDTATTDSS  60
   61 KKVDDNEYYN FTSHFMPSLK NTRELENTIL NLIQRIKEGD DETLVSEKDL ILSVLNRSLA 120
  121 STSHWKLQAQ LSELRATSEG RYAVETNLLK KEVEFLKNKT PKTNESASSA ELRPLLERPL 180
  181 KRKLSLPGLA QRPLSTGARL EGGYGGVSPN SWKTKVPKLP LPASRPSLNL SPQKVPTGTD 240
  241 KVEEDTKIDT LELVENNKPH PRMRRRSDNP ATNEYVRVFH LEKKEPKSRK K

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	ATG12	YDL129W	1	Unpublished Fields Lab Data
View Screen	SCL1	YDL129W	1	Unpublished Fields Lab Data

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	YDL129W	Huh WK, et al. (2003)

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..291]	deduced	N/A	No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2