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Protein Overview: YDL129W

General Information:
Name(s) found: YDL129W [SGD]
Description(s) found:
Found 25 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YDL129W is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 291 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed articleLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRSRRSAE AYLVTPEEPA KNKSERSIES NERVGTREAK SENTSVFSPA YSDTATTDSS  60
   61 KKVDDNEYYN FTSHFMPSLK NTRELENTIL NLIQRIKEGD DETLVSEKDL ILSVLNRSLA 120
  121 STSHWKLQAQ LSELRATSEG RYAVETNLLK KEVEFLKNKT PKTNESASSA ELRPLLERPL 180
  181 KRKLSLPGLA QRPLSTGARL EGGYGGVSPN SWKTKVPKLP LPASRPSLNL SPQKVPTGTD 240
  241 KVEEDTKIDT LELVENNKPH PRMRRRSDNP ATNEYVRVFH LEKKEPKSRK K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen ATG12 YDL129W 1 Unpublished Fields Lab Data
    View Screen SCL1 YDL129W 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YDL129W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..291] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle