General Information: |
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Name(s) found: |
VPS8 /
YAL002W
[SGD]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Saccharomyces cerevisiae |
Length: | 1176 amino acids |
Gene Ontology: |
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Cellular Component: |
membrane fraction
[IDA]
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Biological Process: |
late endosome to vacuole transport
[IGI][IMP]
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Molecular Function: |
molecular_function
[ND]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MGTSKGCVLI FNYNEHLQTI LVPTLSEDPS IHSIRSPVKS IVICSDGTHV AASYETGNIC 60 61 IWNLNVGYRV KPTSEPTNGM TPTPALPAVL HIDDHVNKEI TGLDFFGARH TALIVSDRTG 120 121 KVSLYNGYRR GFWQLVYNSK KILDVNSSKE KLIRSKLSPL ISREKISTNL LSVLTTTHFA 180 181 LILLSPHVSL MFQETVEPSV QNSLVVNSSI SWTQNCSRVA YSVNNKISVI SISSSDFNVQ 240 241 SASHSPEFAE SILSIQWIDQ LLLGVLTISH QFLVLHPQHD FKILLRLDFL IHDLMIPPNK 300 301 YFVISRRSFY LLTNYSFKIG KFVSWSDITL RHILKGDYLG ALEFIESLLQ PYCPLANLLK 360 361 LDNNTEERTK QLMEPFYNLS LAALRFLIKK DNADYNRVYQ LLMVVVRVLQ QSSKKLDSIP 420 421 SLDVFLEQGL EFFELKDNAV YFEVVANIVA QGSVTSISPV LFRSIIDYYA KEENLKVIED 480 481 LIIMLNPTTL DVDLAVKLCQ KYNLFDLLIY IWNKIFDDYQ TPVVDLIYRI SNQSEKCVIF 540 541 NGPQVPPETT IFDYVTYILT GRQYPQNLSI SPSDKCSKIQ RELSAFIFSG FSIKWPSNSN 600 601 HKLYICENPE EEPAFPYFHL LLKSNPSRFL AMLNEVFEAS LFNDDNDMVA SVGEAELVSR 660 661 QYVIDLLLDA MKDTGNSDNI RVLVAIFIAT SISKYPQFIK VSNQALDCVV NTICSSRVQG 720 721 IYEISQIALE SLLPYYHSRT TENFILELKE KNFNKVLFHI YKSENKYASA LSLILETKDI 780 781 EKEYNTDIVS ITDYILKKCP PGSLECGKVT EVIETNFDLL LSRIGIEKCV TIFSDFDYNL 840 841 HQEILEVKNE ETQQKYLDKL FSTPNINNKV DKRLRNLHIE LNCKYKSKRE MILWLNGTVL 900 901 SNAESLQILD LLNQDSNFEA AAIIHERLES FNLAVRDLLS FIEQCLNEGK TNISTLLESL 960 961 RRAFDDCNSA GTEKKSCWIL LITFLITLYG KYPSHDERKD LCNKLLQEAF LGLVRSKSSS1020 1021 QKDSGGEFWE IMSSVLEHQD VILMKVQDLK QLLLNVFNTY KLERSLSELI QKIIEDSSQD1080 1081 LVQQYRKFLS EGWSIHTDDC EICGKKIWGA GLDPLLFLAW ENVQRHQDMI SVDLKTPLVI1140 1141 FKCHHGFHQT CLENLAQKPD EYSCLICQTE SNPKIV |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..392] | N/A | No confident structure predictions are available. | |
2 | View Details | [393..588] | 20.229148 | Region in Clathrin and VPS No confident structure predictions are available. | |
3 | View Details | [589..800] | N/A | No confident structure predictions are available. | |
4 | View Details | [801..1014] | 13.585027 | Region in Clathrin and VPS No confident structure predictions are available. | |
5 | View Details | [1015..1176] | 2.035996 | View MSA. No confident structure predictions are available. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.49 |
Source: Reynolds et al. (2008)