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Protein Overview: MSL2_ARATH

General Information:
Name(s) found: MSL2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79510333|ref|NP_568230.2| MSL2 (MscS-LIKE 2); ion channel [Arabidopsis thaliana] [NCBI NR]
  • gi|62321006|dbj|BAD94053.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110739865|dbj|BAF01838.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • Mechanosensitive ion channel protein 2, chloroplastic OS=Arabidopsis thaliana GN=MSL2 PE=2 SV=1 [Swiss-Prot]
  • Tax_Id=3702 Similar to mechanosensitive ion channel domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: MSL2 | MSL2 (MSCS-LIKE 2) | chr5:3300377-3304006 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MSL2 | MSCS-like 2 | chr5:3300376-3304005 REVERSE LENGTH=673 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 673 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    membrane [ISS]
    plastid envelope [IDA]
    Biological Process: plastid organization [IGI]
    Molecular Function: ion channel activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALYGTLQLS HSLGLCRNQR FCNPENSAMR RRLHISNGPL SLGVPLGQHG FSNILLSNYL  60
   61 RRPICSVPCR TTAFRCHSFS ASGKAIEPAV KAVTVVLTKS HGLMQQFPFV YKLVPAVALL 120
  121 VFSLWGLVPF ARQGRNILLN KNDNGWKKSG TYHVMTSYVQ PLLLWLGALF ICRALDPVVL 180
  181 PTEASKIVKD RLLNFVRSLS TVLAFAYCLS SLIQQTQKLF SETSNPSDTR NMGFQFAGKA 240
  241 LYSAVWVAAV SLFMELLGFS TQKWLTAGGL GTVLITLAGR EILTNFLSSV MIHATRPFVL 300
  301 NEWIQTKIEG YEVSGTVEHV GWWSPTIIRG EDREAIHIPN HKFTVNVVRN LTQKTHWRIK 360
  361 THLAISHLDV NKINNIVADM RKVLAKNPMV EQQRLHRRVF LENVIPENQA LSILISCFVK 420
  421 TSHHEEYLGV KEAILLDLLR VISHHRARLA TPIRTIRKMY TETDVENTPF GESMYGGVTS 480
  481 RRPLMLIEPA YKINGEDKSK SQNRAAKPTA EQENKGSNPK SKETSSPDLK ANVKVGESPV 540
  541 SDTNKVPEET VAKPVIKAVS KPPTPKDTET SGTEKPKAKR SGGTIKSTKT DETDSSTSSA 600
  601 SRSTLEENIV LGVALEGSKR TLPIEEEIHS PPMETDAKEL TGARRSGGNG PLVADKEQKD 660
  661 SQSQPNSGAS TEP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] deduced N/A No confident structure predictions are available.
    2 View Details [147..473] PSI-BLAST 52.0 No description for 2vv5A was found.
    3 View Details [474..673] MSA 18.165997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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