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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MSL2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALYGTLQLS HSLGLCRNQR FCNPENSAMR RRLHISNGPL SLGVPLGQHG FSNILLSNYL  60
   61 RRPICSVPCR TTAFRCHSFS ASGKAIEPAV KAVTVVLTKS HGLMQQFPFV YKLVPAVALL 120
  121 VFSLWGLVPF ARQGRNILLN KNDNGWKKSG TYHVMTSYVQ PLLLWLGALF ICRALDPVVL 180
  181 PTEASKIVKD RLLNFVRSLS TVLAFAYCLS SLIQQTQKLF SETSNPSDTR NMGFQFAGKA 240
  241 LYSAVWVAAV SLFMELLGFS TQKWLTAGGL GTVLITLAGR EILTNFLSSV MIHATRPFVL 300
  301 NEWIQTKIEG YEVSGTVEHV GWWSPTIIRG EDREAIHIPN HKFTVNVVRN LTQKTHWRIK 360
  361 THLAISHLDV NKINNIVADM RKVLAKNPMV EQQRLHRRVF LENVIPENQA LSILISCFVK 420
  421 TSHHEEYLGV KEAILLDLLR VISHHRARLA TPIRTIRKMY TETDVENTPF GESMYGGVTS 480
  481 RRPLMLIEPA YKINGEDKSK SQNRAAKPTA EQENKGSNPK SKETSSPDLK ANVKVGESPV 540
  541 SDTNKVPEET VAKPVIKAVS KPPTPKDTET SGTEKPKAKR SGGTIKSTKT DETDSSTSSA 600
  601 SRSTLEENIV LGVALEGSKR TLPIEEEIHS PPMETDAKEL TGARRSGGNG PLVADKEQKD 660
  661 SQSQPNSGAS TEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle