YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: TEB_ARATH

General Information:
Name(s) found: TEB_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • Helicase and polymerase-containing protein TEBICHI OS=Arabidopsis thaliana GN=TEB PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 2154 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: photomorphogenesis [IMP]
    DNA replication [IGI]
    DNA recombination [IGI]
    regulation of gene expression [IGI]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    DNA binding [IEA]
    DNA-directed DNA polymerase activity [IEA]
    ATP-dependent helicase activity [IEA]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSDSSKSRI DQFYVSKKRK HQSPNLKSGR NEKNVKVTGE RSPGDKGTLD SYLKASLDDK  60
   61 STTNSGLQAR QEAFTRKLDL EVSASSVGQN IHPCLPKPVS FATFKECLGQ NGSQDLHKEG 120
  121 VAAETHATDG LLCANQKDNS ELRDFATSFL SLYCSGVQSV VGSPPHQKEN ELKRRSSSSS 180
  181 LAQDIQISHK RRCESENIPS LDDLTNPLGS KPESLARNGN NRDKPVSDPT KKMPSNESVE 240
  241 IPMGLRKCSK APESSAHLTE FHTPGSAIKS CPVGTPKSGC GSSMFSPGEA FWNEAIQVAD 300
  301 GLTIPIENFG SVEAKVRDQH VTILSCSKKT DKCTEKLERS LDLDEIRVKD KDAIGFSKVV 360
  361 EKHGRDFNKE VYQLPVKNLE LLFQDKNING GIQERCASFD QNNITLGSSR ISESAFVGNK 420
  421 GCENLDIANN AQADKGLIGK MYPEPEGKKV LLCEENRGVR SVSMISNMRK PVGSSESEES 480
  481 HTPSSSHRNY DGLSLSTWLP SEVCSVYNKK GISKLYPWQV ECLQVDGVLQ KRNLVYCAST 540
  541 SAGKSFVAEV LMLRRVIRTG KMALLVLPYV SICAEKAEHL EVLLEPLGKH VRSYYGNQGG 600
  601 GTLPKDTSVA VCTIEKANSL INRLLEEGRL SELGIIVIDE LHMVGDQHRG YLLELMLTKL 660
  661 RYAAGEGSSE SSSGESSGTS SGKADPAHGL QIVGMSATMP NVGAVADWLQ AALYQTEFRP 720
  721 VPLEEYIKVG STIYNKKMEV VRTIPKAADM GGKDPDHIVE LCNEVVQEGN SVLIFCSSRK 780
  781 GCESTARHIS KLIKNVPVNV DGENSEFMDI RSAIDALRRS PSGVDPVLEE TLPSGVAYHH 840
  841 AGLTVEEREI VETCYRKGLV RVLTATSTLA AGVNLPARRV IFRQPMIGRD FIDGTRYKQM 900
  901 SGRAGRTGID TKGDSVLICK PGELKRIMAL LNETCPPLQS CLSEDKNGMT HAILEVVAGG 960
  961 IVQTAKDIHR YVRCTLLNST KPFQDVVKSA QDSLRWLCHR KFLEWNEETK LYTTTPLGRG1020
 1021 SFGSSLCPEE SLIVLDDLLR AREGLVMASD LHLVYLVTPI NVGVEPNWEL YYERFMELSP1080
 1081 LEQSVGNRVG VVEPFLMRMA HGATVRTLNR PQDVKKNLRG EYDSRHGSTS MKMLSDEQML1140
 1141 RVCKRFFVAL ILSKLVQEAS VTEVCEAFKV ARGMVQALQE NAGRFSSMVS VFCERLGWHD1200
 1201 LEGLVAKFQN RVSFGVRAEI VELTSIPYIK GSRARALYKA GLRTSQAIAE ASIPEIVKAL1260
 1261 FESSAWAAEG TGQRRIHLGL AKKIKNGARK IVLEKAEEAR AAAFSAFKSL GLDVNELSKP1320
 1321 LPLAPASSLN GQETTERDIS RGSVGPDGLQ QSIEGHMECE NFDMDNHREK PSEVLGDATL1380
 1381 GVSSEINLTS RLPNFRPIGT AVGTNGPSAV SILSSDTFPI PVYDNREIKP KDNVEQHLTR1440
 1441 NDHIPLSSNK DGTGEKGPVT AGNISGGFDS FLELWGSAGE FFFDLHYNKL QDLNSRISYE1500
 1501 IHGIAICWNC SPVYYVNLNK DLPNLECVEK QKLIEDAVIG KSEVLASHNM LDVIKSRWNK1560
 1561 ISKIMGNVNT RKFTWNLKVQ IQVLKSPAIS IQRCTRLNLP EGIRDELVDG SWLMMPPLHT1620
 1621 SHTIDMSIVI WILWPDEERH SNPNIDKEVK KRLSPEAAEA ANRSGRWRNQ IRRVAHNGCC1680
 1681 RRVAQTRALC SALWKILVSE ELLQALTTIE MPLVNVLADM ELWGIGIDIE GCLRARNILR1740
 1741 DKLRSLEKKA FELAGMTFSL HNPADIANVL FGQLKLPIPE NQSKGKLHPS TDKHCLDLLR1800
 1801 NEHPVVPIIK EHRTLAKLLN CTLGSICSLA KLRLSTQRYT LHGRWLQTST ATGRLSIEEP1860
 1861 NLQSVEHEVE FKLDKNGRDV SSDADRYKIN ARDFFVPTQE NWLLLTADYS QIELRLMAHF1920
 1921 SRDSSLISKL SQPEGDVFTM IAAKWTGKAE DSVSPHDRDQ TKRLIYGILY GMGANRLAEQ1980
 1981 LECTSDEAKE KIRSFKSSFP AVTSWLNETI SFCQEKGYIQ TLKGRRRFLS KIKFGNAKEK2040
 2041 SKAQRQAVNS MCQGSAADII KIAMINIYSA IAEDVDTAAS SSSSETRFHM LKGRCRILLQ2100
 2101 VHDELVLEVD PSYVKLAAML LQTSMENAVS LLVPLHVKLK VGKTWGSLEP FQTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] MSA 1.264996 View MSA. No confident structure predictions are available.
    2 View Details [170..1006] PSI-BLAST 29.0 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
    3 View Details [1007..1131] PSI-BLAST 70.39794 No description for 2p6rA was found.
    4 View Details [1132..1199] deduced N/A No confident structure predictions are available.
    5 View Details [1200..2154] PSI-BLAST 1000.0 5' to 3' exonuclease domain of DNA polymerase Taq; Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle