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Protein Overview: gi|115440669, gi...

General Information:
Name(s) found: gi|56785062 [NCBI NR]
gi|115440669 [NCBI NR]
gi|113534145 [NCBI NR]
Description(s) found:
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  • gi|56785062|dbj|BAD82701.1| putative ZnF_RBZ domain protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115440669|ref|NP_001044614.1| Os01g0815700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113534145|dbj|BAF06528.1| Os01g0815700 [Oryza sativa Japonica Group] [NCBI NR]
  • putative ZnF_RBZ domain protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Os01g0815700 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 950 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGASKLLSS LLLTSSPLRL RPSAGAFALF LSPPASRRHL LLSSPAPLRT LSTASASAAA  60
   61 GGASSDSYSS GSCHSPFPEW SRLVDRLSAA GYGARAPSPA DELDLDPECG LSSDAEAAVS 120
  121 SFLAFARDRP DLLRSLPRKD VEVLVANAAP ALFKDGEASE LRLRQYLAGE GSDVTQSERA 180
  181 ETIDIVRYLL SYAYGSPVSY LKDKELTDSA VRNILAEFVS FSGFPQTSSY AESTARQNTL 240
  241 GSRPPGQNIE MKRGDWICTR CSFMNFARNA RCLECNEHRP KKMLTGGEWE CPQCVYYNYG 300
  301 RNMSCLRCSC KRPGTIPPNP AGAGLDGVAQ FLNTSIVGKS EIERKLAEND QKAERWLNKV 360
  361 SQLDDSADLS SLAADEDFPE IMPIRKGVNK FVVSTRKTPL ERRLANAQYS SNNSPQDGSS 420
  421 DSKISKTLDR ILGRSTSTSV QNNQSGDGDV NTSSNKTTSN LGGIDPVPFV PLSADQFAKP 480
  481 QNSFGDGQSD TQISTEADSM AKSQMDSMER RDDKRSFDTT EEWSKKVAEL SNVKDFPSAI 540
  541 SDQDFPEIMP MRKGENRFVI SKKKDRSLTS PQYKRRSVLE HADNSNFIPF VPFPPDYFAK 600
  601 KNKPVENSSD AGIVPEGPPS AEKLPETKYS SGNLGNFQNS SQVMGSQAAN NMNNENRNGN 660
  661 YPHQNLSTSG YGYGESITYQ HQPQSQGMVG RSGGASETGT RNANNNQGSF SESRDRSTYN 720
  721 RGSHSAQPPY KSGYGNNNNA WSSNNNGSNN AWSSTRDYDN GGRSDNNPYY NSSTWSSNST 780
  781 YSNNAAWSSN SSYNSNSAWS SNSSYNSNSA WSNNSNNSWS GSYSDNGGTG SGSSASRPNQ 840
  841 TAGYSSYGES ANRGYTGKSL EGSAVKDPDP LDMSEEAKAE RWFRRAAQIK DISELANIPD 900
  901 EDFPEIMPMR KGVNRFVVSK RKTPLERRLT SPQYRRNLPI VSSEPNEDAN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] deduced N/A No confident structure predictions are available.
    2 View Details [209..308] MSA 3.147989 View MSA. No confident structure predictions are available.
    3 View Details [309..439] deduced N/A No confident structure predictions are available.
    4 View Details [440..517] deduced N/A No confident structure predictions are available.
    5 View Details [518..685] deduced N/A No confident structure predictions are available.
    6 View Details [686..858] deduced N/A No confident structure predictions are available.
    7 View Details [859..950] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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