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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115440669, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGASKLLSS LLLTSSPLRL RPSAGAFALF LSPPASRRHL LLSSPAPLRT LSTASASAAA  60
   61 GGASSDSYSS GSCHSPFPEW SRLVDRLSAA GYGARAPSPA DELDLDPECG LSSDAEAAVS 120
  121 SFLAFARDRP DLLRSLPRKD VEVLVANAAP ALFKDGEASE LRLRQYLAGE GSDVTQSERA 180
  181 ETIDIVRYLL SYAYGSPVSY LKDKELTDSA VRNILAEFVS FSGFPQTSSY AESTARQNTL 240
  241 GSRPPGQNIE MKRGDWICTR CSFMNFARNA RCLECNEHRP KKMLTGGEWE CPQCVYYNYG 300
  301 RNMSCLRCSC KRPGTIPPNP AGAGLDGVAQ FLNTSIVGKS EIERKLAEND QKAERWLNKV 360
  361 SQLDDSADLS SLAADEDFPE IMPIRKGVNK FVVSTRKTPL ERRLANAQYS SNNSPQDGSS 420
  421 DSKISKTLDR ILGRSTSTSV QNNQSGDGDV NTSSNKTTSN LGGIDPVPFV PLSADQFAKP 480
  481 QNSFGDGQSD TQISTEADSM AKSQMDSMER RDDKRSFDTT EEWSKKVAEL SNVKDFPSAI 540
  541 SDQDFPEIMP MRKGENRFVI SKKKDRSLTS PQYKRRSVLE HADNSNFIPF VPFPPDYFAK 600
  601 KNKPVENSSD AGIVPEGPPS AEKLPETKYS SGNLGNFQNS SQVMGSQAAN NMNNENRNGN 660
  661 YPHQNLSTSG YGYGESITYQ HQPQSQGMVG RSGGASETGT RNANNNQGSF SESRDRSTYN 720
  721 RGSHSAQPPY KSGYGNNNNA WSSNNNGSNN AWSSTRDYDN GGRSDNNPYY NSSTWSSNST 780
  781 YSNNAAWSSN SSYNSNSAWS SNSSYNSNSA WSNNSNNSWS GSYSDNGGTG SGSSASRPNQ 840
  841 TAGYSSYGES ANRGYTGKSL EGSAVKDPDP LDMSEEAKAE RWFRRAAQIK DISELANIPD 900
  901 EDFPEIMPMR KGVNRFVVSK RKTPLERRLT SPQYRRNLPI VSSEPNEDAN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle