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Protein Overview: YEPB_SCHPO

General Information:
Name(s) found: YEPB_SCHPO [Swiss-Prot]
Description(s) found:
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  • gi|19114713|ref|NP_593801.1| hypothetical protein SPAC23H3.11c [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.11c PE=3 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 629 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKGHSDLPR QPERVAQNPF LTFDQDSFPS SYGSSLNVSE QTSGSSSTSP LPQISCLLRK  60
   61 DDVPLANKEL SRSLIHVQEL SRYPPFYNQD HQHLGVPRSR VGSDVWKMRE KSFLSPSQFS 120
  121 SIDLSWVYRS KEEDDDFHDP KSSVVSLMGE EDYLGWSRFC DLFFLFVLSL GIGLLFIVFP 180
  181 ALTFTGNITP SKEKFDAIMA NQITDHLFAH MRVPRTNLID KDTPSTAYHR TGYNGRKYNL 240
  241 VFSDEFNKEG RSFYSGNDQF WEAVNIHYAA TNDLDWYDPD AITTVNGTLA IQLDAFWNRD 300
  301 LNFRSGMLQS WNKLCLKGGI IEVSASLAGS GEHAGLWPGI WTLGNLARPG YMATTDGVWP 360
  361 YAYSQCDVGI TPNQSSYDGI SYLPGQKLPN CVCLNEDHPS PGVGRGAPEI DILEGSTEKL 420
  421 HPDDELDIGV VSQSGQFAPF DFFWLPNYDY LAVYNDSITH MNSYVGGPFQ QALSGITTLN 480
  481 NTWYGGNAFQ IYGFDYKPGE GTNGYVSWFV GPNYTWSMLG SAVGQNGNVG PRQISEEPMS 540
  541 IIFNLGISNN WAYYYFRDLS FPAVMYIDYI RIYQDPDDTN SHIGCDPPGY PTTKYIEEHP 600
  601 LAYKNPNATT WEMAGYTWPK NSLMHKCNT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..210] MSA 1.067981 View MSA. No confident structure predictions are available.
    2 View Details [211..629] PSI-BLAST 19.522879 kappa-Carrageenase, catalytic

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.82375683349763 bayes_pls_golite062009
  • protein binding
    		•  0.964880666937228 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.351620947205387 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.21069016920331 bayes_pls_golite062009
  • DNA binding
    		•  0.0547031308830381 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.0124152418993231 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle