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Protein Overview: CG7907-PB, CG7907-PC

General Information:
Name(s) found: CG7907-PC / FBpp0112174 [FlyBase]
CG7907-PB / FBpp0112173 [FlyBase]
Description(s) found:
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  • gi|66771819|gb|AAY55221.1| IP13758p [Drosophila melanogaster] [NCBI NR]
  • gi|66771761|gb|AAY55192.1| IP13958p [Drosophila melanogaster] [NCBI NR]
  • gi|161078482|ref|NP_001097861.1| CG7907, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|161078480|ref|NP_001097860.1| CG7907, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|158030331|gb|ABW08722.1| CG7907, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|158030330|gb|ABW08721.1| CG7907, isoform B [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG7907 (CG7907, FBgn0038887). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:17229457..17232412. It has the cytological map location 93E1. Based on sequence similarity, it is predicted to have molecular function</span>: RNA cap binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: nuclear mRNA splicing, via spliceosome. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • type=protein; loc=3R:join(17229820..17231231,17231301..17231610,17231700..17232239); ID=FBpp0112173; name=CG7907-PB; parent=FBgn0038887,FBtr0113261; dbxref=FlyBase:FBpp0112173,FlyBase_Annotation_IDs:CG7907-PB,REFSEQ:NP_001097860,GB_protein:ABW08721; MD5=6 [fly-100309-contam.fasta]
  • type=protein; loc=3R:join(17229820..17231231,17231301..17231610,17231700..17232239); ID=FBpp0112174; name=CG7907-PC; parent=FBgn0038887,FBtr0113262; dbxref=FlyBase:FBpp0112174,FlyBase_Annotation_IDs:CG7907-PC,REFSEQ:NP_001097861,GB_protein:ABW08722; MD5=6 [fly-100309-contam.fasta]
  • IP13758p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP13958p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(17229820..17231231,17231301..17231610,17231700..17232239); ID=FBpp0112173; name=CG7907-PB; parent=FBgn0038887,FBtr0113261; dbxref=FlyBase:FBpp0112173,FlyBase_Annotation_IDs:CG7907-PB,REFSEQ:NP_001097860,GB_protein:ABW08721; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(17229820..17231231,17231301..17231610,17231700..17232239); ID=FBpp0112174; name=CG7907-PC; parent=FBgn0038887,FBtr0113262; dbxref=FlyBase:FBpp0112174,FlyBase_Annotation_IDs:CG7907-PC,REFSEQ:NP_001097861,GB_protein:ABW08722; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(17229820..17231231,17231301..17231610,17231700..17232239); ID=FBpp0112173; name=CG7907-PB; parent=FBgn0038887,FBtr0113261; dbxref=FlyBase:FBpp0112173,FlyBase_Annotation_IDs:CG7907-PB,REFSEQ:NP_001097860,GB_protein:ABW08721; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3R:join(17229820..17231231,17231301..17231610,17231700..17232239); ID=FBpp0112174; name=CG7907-PC; parent=FBgn0038887,FBtr0113262; dbxref=FlyBase:FBpp0112174,FlyBase_Annotation_IDs:CG7907-PC,REFSEQ:NP_001097861,GB_protein:ABW08722; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG7907, isoform B OS=Drosophila melanogaster GN=CG7907 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(17229820..17231231,17231301..17231610,17231700..17232239); ID=FBpp0112173; name=CG7907-PB; parent=FBgn0038887,FBtr0113261; dbxref=FlyBase:FBpp0112173,FlyBase_Annotation_IDs:CG7907-PB,REFSEQ:NP_001097860,GB_protein:ABW08721,FlyMine:FBpp0112173,modMine:FBpp0112173; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(17229820..17231231,17231301..17231610,17231700..17232239); ID=FBpp0112174; name=CG7907-PC; parent=FBgn0038887,FBtr0113262; dbxref=FlyBase:FBpp0112174,FlyBase_Annotation_IDs:CG7907-PC,REFSEQ:NP_001097861,GB_protein:ABW08722; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(21404098..21405509,21405579..21405888,21405978..21406517); ID=FBpp0112173; name=CG7907-PB; parent=FBgn0038887,FBtr0113261; dbxref=FlyBase:FBpp0112173,FlyBase_Annotation_IDs:CG7907-PB,REFSEQ:NP_001097860,GB_protein:ABW08721,FlyMine:FBpp0112173,modMine:FBpp0112173; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(21404098..21405509,21405579..21405888,21405978..21406517); ID=FBpp0112174; name=CG7907-PC; parent=FBgn0038887,FBtr0113262; dbxref=FlyBase:FBpp0112174,FlyBase_Annotation_IDs:CG7907-PC,REFSEQ:NP_001097861,GB_protein:ABW08722; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(21404098..21405509,21405579..21405888,21405978..21406517); ID=FBpp0112173; name=CG7907-PB; parent=FBgn0038887,FBtr0113261; dbxref=FlyBase:FBpp0112173,FlyBase_Annotation_IDs:CG7907-PB,REFSEQ:NP_001097860,GB_protein:ABW08721,FlyMine:FBpp0112173,modMine:FBpp0112173; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3R:join(21404098..21405509,21405579..21405888,21405978..21406517); ID=FBpp0112174; name=CG7907-PC; parent=FBgn0038887,FBtr0113262; dbxref=FlyBase:FBpp0112174,FlyBase_Annotation_IDs:CG7907-PC,REFSEQ:NP_001097861,GB_protein:ABW08722; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0112173 type=protein; loc=3R:join(21404098..21405509,21405579..21405888,21405978..21406517); ID=FBpp0112173; name=CG7907-PB; parent=FBgn0038887,FBtr0113261; dbxref=FlyBase:FBpp0112173,FlyBase_Annotation_IDs:CG7907-PB,REFSEQ:NP_001097860,GB_protein:ABW08721,FlyMine:FBpp0112173,modMine:FBpp0112173; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0112174 type=protein; loc=3R:join(21404098..21405509,21405579..21405888,21405978..21406517); ID=FBpp0112174; name=CG7907-PC; parent=FBgn0038887,FBtr0113262; dbxref=FlyBase:FBpp0112174,FlyBase_Annotation_IDs:CG7907-PC,REFSEQ:NP_001097861,GB_protein:ABW08722; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(21404098..21405509,21405579..21405888,21405978..21406517); ID=FBpp0112173; name=CG7907-PB; parent=FBgn0038887,FBtr0113261; dbxref=FlyBase:FBpp0112173,FlyBase_Annotation_IDs:CG7907-PB,REFSEQ:NP_001097860,GB_protein:ABW08721,UniProt/TrEMBL:Q4V551,FlyMine:FBpp0112173,modMine:FBpp0112173; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3R:join(21404098..21405509,21405579..21405888,21405978..21406517); ID=FBpp0112174; name=CG7907-PC; parent=FBgn0038887,FBtr0113262; dbxref=FlyBase:FBpp0112174,FlyBase_Annotation_IDs:CG7907-PC,REFSEQ:NP_001097861,GB_protein:ABW08722,UniProt/TrEMBL:Q4V551; MD5=6f0419ab8b9aa72b3604849c79ff823e; length=753; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 753 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    mRNA cap binding complex [ISS]
    Biological Process: RNA metabolic process [IEA]
    nuclear mRNA splicing, via spliceosome [ISS]
    Molecular Function: protein binding [IEA]
    RNA cap binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRRKREDSS DEEGDDCRQK RTAETTVKTV EQLMRELSFP GHTPLELKLG NLGYLLGKGM  60
   61 SVDLKENLIN ELVICLGYYP GQASAYATLV GLINVADFEF GSECLLFMAH KVGESVHIRD 120
  121 WNRCRGVVHC MVDLYHCQVL PSSYILKLLA AFLKDCEALK DPDDLVGVTP QIRRDFLAYC 180
  181 VLSAMPLIGR DLEGETAFDK LIVSLQIYIK KRSALHTNML SVWPDFNQRD YLELLWQQVD 240
  241 GMRQNHWAEP EHQLIPRPYK SFSETLSHGR IHQLRDYDLA AHEERCRYPL PRVCFRIFSC 300
  301 DSVGEIPNMP PPVSIERHLL EAHILDILIS FHKERKICAD SLLMYAASKP QLPVYYCIVE 360
  361 VILGEMLRLP TANWSTIAYG SILVELCKRQ PDKIPQVVAQ ALDIIYNRLN SMSVACFDRL 420
  421 VNWVSHHISN FGFNCQWSKW AQGLPSPIDP SATNLQPKVV FLRELLKKCF RLSYHQRIKD 480
  481 VVPDILADFL PPPVLPHFKF VDETLPGAIL SKDLLEAMRS PQASPEMISE IIKSSTGIGP 540
  541 LLKINVFTQN CLHLGSKSFS HTFGILRKYH SVFKDLVAGD PERQAAVLNG IFDVWVASDQ 600
  601 YKFVVTEKLV TGLIIEPISV VRWIFGPSMR KELTKIYIWE LLHSALRHLK RVQQKIEVVD 660
  661 VDDPSACDPV VKGILFTIVQ RFVKTLCGAP FADEGTEEHY WFQWVLGRLE ETLFIYADDF 720
  721 RVINNKLIKM SEDASDLRPE ISKTIAAFVA CVM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle