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Protein Overview: CG5379-PA, FBpp0...

General Information:
Name(s) found: FBpp0307976 [FlyBase]
CG5379-PA / FBpp0083628 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • type=protein; loc=3R:complement(18212326..18212712,18212781..18213043,18213101..18213298,18214054..18214117); ID=FBpp0307976; name=CG5379-PB; parent=FBgn0038956,FBtr0337047; dbxref=REFSEQ:NP_001262833,GB_protein:AGB96213,FlyBase:FBpp0307976,FlyBase_Annotation_IDs:CG5379-PB; MD5=4c4d912648ec5f8bb3cfe5dfbb6b0aba; length=303; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5379 (CG5379, FBgn0038956). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:18212211..18214194. It has the cytological map location 94A11. Based on sequence similarity, it is predicted to have molecular function</span>: carbonate dehydratase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: one-carbon metabolic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 303 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: one-carbon metabolic process [IEA]
    Molecular Function: zinc ion binding [IEA]
    carbonate dehydratase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLPALDDFY QRLLFLLPFA ANFRSTDFDY KSPERWPEKY PNCGGSEQSP IAISRRKAIP  60
   61 LNLPPLIFAL YDEFFDELVT IRNSGHTVEF KVPTTIYGVK PYVTGGLLRD CYDAEAVHFH 120
  121 WGSPESKGSE HLLNGRRFDL EMHIVHRNTK YLNLEEAVKY SDGVTVLAVL FKVVRSGPFF 180
  181 YQPGLSEIFS SLLHLGNFNA SYTVQERLTL GSLLGSLDRG NFYTYKGSLT TPPCSPVVQW 240
  241 HVFGEVLPIS HQDLPKFWNL RDERGRPLLK NFRPLQSQEN RLIFHRQHIV PLQQEHLQEL 300
  301 IWL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..303] PSI-BLAST 78.221849 H119Q CARBONIC ANHYDRASE II

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.59667704693142 bayes_pls_golite062009
  • protein binding
    		•  1.30419076438266 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  1.07671729977648 bayes_pls_golite062009
  • hydro-lyase activity
    		•  1.04168520389922 bayes_pls_golite062009
  • lyase activity
    		•  1.00117510739063 bayes_pls_golite062009
  • catalytic activity
    		•  0.97285738666961 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.36067052386032 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle