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Protein Overview: gi|63147392, gi|...

General Information:
Name(s) found: gi|63147392 [NCBI NR]
gi|145361161 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|63147392|gb|AAY34169.1| At5g22110 [Arabidopsis thaliana] [NCBI NR]
  • gi|145361161|ref|NP_680197.2| ATDPB2 (ARABIDOPSIS THALIANA DNA POLYMERASE EPSILON SUBUNIT B2); DNA binding / DNA-directed DNA polymerase/ nucleic acid binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 526 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    epsilon DNA polymerase complex [IPI]
    Biological Process: DNA replication [IEA]
    DNA-dependent DNA replication [IEA]
    Molecular Function: nucleic acid binding [IEA]
    DNA binding [IEA]
    DNA-directed DNA polymerase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTSQKRKK IQKKFKNRGY NLKFDALDEI LVFADQFPDD DDGEAIDLLL DNLQETHKSS  60
   61 TVDAESVRGL INRLLGAHNA PEEPTTSASS LAIIDAFLVP KFGYDSVKKK FNEHTSSLPI 120
  121 HGEASAKTAL YRERFMLLSQ RVSRAEHFSR PAFDAEMSQF ENNEISSIQS LISQRGRKWV 180
  181 MGVISQLEDG HFYLEDLSAS VEIDLSKAKI TTGFFTENTI ILAEGEMQVN GIFQVITCGF 240
  241 PPLEDRDKTL KAHSEYDFFG GGTLTKEEMI KLADLERQAV NDTFVILSDI WLDDEEVMRK 300
  301 LETVLDGFES VETVPSLFVF MGNFCSRPCN LSFGSYSSLR EQFGKLGRMI GNHPRLKENS 360
  361 RFLFIPGPED AGPSTVLPRC ALPKYLTEEL RNIIPNAIFS SNPCRVKFYN QEIVFFRQDL 420
  421 LYRMRRSCLV TPSSEETNDP FKHLVYTITH QSHLCPLPLM VQPIIWNYDH ALRLYPTPHT 480
  481 IVLGDKSEQE VCKFGGTTCF NPGSFSTDST FVAYRPSTQE VELSAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] PSI-BLAST 11.154902 No description for 2v6zM was found.
    2 View Details [121..289] MSA 2.15599 View MSA. No confident structure predictions are available.
    3 View Details [290..434] MSA 1.178995 View MSA. No confident structure predictions are available.
    4 View Details [435..526] MSA 5.174994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle