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Protein Overview: psq-PK, psq-PJ

General Information:
Name(s) found: psq-PK / FBpp0100067 [FlyBase]
psq-PJ / FBpp0100066 [FlyBase]
Description(s) found:
Found 35 descriptions.
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  • The gene pipsqueak is referred to in FlyBase by the symbol Dmel\psq (CG2368, FBgn0004399). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6445409..6503753. It has the cytological map location 47A13-47B1. It is reported to have molecular function</span>: DNA binding. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior; imaginal disc-derived wing morphogenesis. 79 alleles are reported. The phenotypes of these alleles are annotated with 25 unique terms, many of which group under: embryonic abdomen; embryonic segment; organ system; embryonic tagma; peripheral nervous system; female germline cyst; external compound sense organ; adult segment; nervous system; adult mesothoracic segment. It has 12 annotated transcripts and 12 annotated polypeptides. [FlyBase]
  • The gene pipsqueak is referred to in FlyBase by the symbol Dmel\psq (CG2368, FBgn0004399). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6445409..6503753. It has the cytological map location 47A13-47B1. It is reported to have molecular function</span>: DNA binding. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior; imaginal disc-derived wing morphogenesis. 79 alleles are reported. The phenotypes of these alleles are annotated with 25 unique terms, many of which group under: embryonic abdomen; embryonic segment; organ system; embryonic tagma; peripheral nervous system; female germline cyst; external compound sense organ; adult segment; nervous system; adult mesothoracic segment. It has 12 annotated transcripts and 12 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 639 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: gene silencing [TAS]
    imaginal disc-derived wing morphogenesis [IMP]
    pole plasm assembly [NAS]
    olfactory behavior [IMP]
    Molecular Function: DNA binding [IEA][NAS][TAS]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNGGLLGVP MGFLDFTPEP PAPSATPVTV TEHVDLSCNP STDTRDLSNT TEPLDIDNHL  60
   61 AQQIHRLDQS PMHSISHHHT GDESNSNLVQ HIKSEVIEAK HLAAQHHALS QAQQQHAHHQ 120
  121 AHQQHQQHQQ QQHQQQQQHL HAQQLLAQSQ LQQQQQQQQQ QQQHHQQQQQ QAAAAAAAAG 180
  181 VHGQHGGHVT HADIGGATVM EIDPSQIKHE PGMIITPEIV NMMSSGHMDM YNSDTSEDSM 240
  241 MIANGSPHDQ KEPHYTNLDQ QHGLGGSVCG PGPGGAGGGG GMSGGAGSGS GEKGQFNGPK 300
  301 AWTQDDMNSA LDALKNQNMS LTKASAIYGI PSTTLWQRAH RMGIETPKKE GGTKSWNEDA 360
  361 LQNALEALRS GQISANKASK AFGIPSSTLY KIARREGIRL AAPFNAAPTT WTPEDLERAL 420
  421 EAIRAGNTSV QKASAEFGIP TGTLYGRCKR EGIELSRSNP TPWSEDAMNE ALNSVRVGQM 480
  481 SINQAAIHYN LPYSSLYGRF KRGKYDVVAN TSGVALLNTS GNTTGSIEII EHSQENSLHM 540
  541 LQQQFPYSPS PHPPTPQHHS TPQHHSSAQQ GPPTPQHMQQ HVVHMQQQQQ QQQQQSPHPG 600
  601 HHPQHMQQDV VTSSSQVVHS QQQQQLQQIY QHHGTPERS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..289] FFAS03 0.992 No description for 2i1jA was found.
    2 View Details [290..353] deduced N/A No confident structure predictions are available.
    3 View Details [354..460] FFAS03 1.11 Structure of the bipartite DNA-binding domain of Tc3 transposase bound to transposon DNA
    4 View Details [461..639] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.232528774113254 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle