| Protein: | psq-PK, psq-PJ |
| Organism: | Drosophila melanogaster |
| Length: | 639 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for psq-PK, psq-PJ.
| Description | E-value | Query Range |
Subject Range |
|
|
886.0 | [0..9] | [636..434] |
|
Region A: Residues: [1-289] |
1 11 21 31 41 51
| | | | | |
1 MQNGGLLGVP MGFLDFTPEP PAPSATPVTV TEHVDLSCNP STDTRDLSNT TEPLDIDNHL 60
61 AQQIHRLDQS PMHSISHHHT GDESNSNLVQ HIKSEVIEAK HLAAQHHALS QAQQQHAHHQ 120
121 AHQQHQQHQQ QQHQQQQQHL HAQQLLAQSQ LQQQQQQQQQ QQQHHQQQQQ QAAAAAAAAG 180
181 VHGQHGGHVT HADIGGATVM EIDPSQIKHE PGMIITPEIV NMMSSGHMDM YNSDTSEDSM 240
241 MIANGSPHDQ KEPHYTNLDQ QHGLGGSVCG PGPGGAGGGG GMSGGAGSG
|
| Detection Method: |  |
| Confidence: | 0.992 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [290-353] |
1 11 21 31 41 51
| | | | | |
1 SGEKGQFNGP KAWTQDDMNS ALDALKNQNM SLTKASAIYG IPSTTLWQRA HRMGIETPKK 60
61 EGGT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [354-460] |
1 11 21 31 41 51
| | | | | |
1 KSWNEDALQN ALEALRSGQI SANKASKAFG IPSSTLYKIA RREGIRLAAP FNAAPTTWTP 60
61 EDLERALEAI RAGNTSVQKA SAEFGIPTGT LYGRCKREGI ELSRSNP
|
| Detection Method: | |
| Confidence: | 1.11 |
| Match: | 1u78A |
| Description: | Structure of the bipartite DNA-binding domain of Tc3 transposase bound to transposon DNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.232528774113254 | bayes_pls_golite062009 |
|
Region A: Residues: [461-639] |
1 11 21 31 41 51
| | | | | |
1 TPWSEDAMNE ALNSVRVGQM SINQAAIHYN LPYSSLYGRF KRGKYDVVAN TSGVALLNTS 60
61 GNTTGSIEII EHSQENSLHM LQQQFPYSPS PHPPTPQHHS TPQHHSSAQQ GPPTPQHMQQ 120
121 HVVHMQQQQQ QQQQQSPHPG HHPQHMQQDV VTSSSQVVHS QQQQQLQQIY QHHGTPERS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
