YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|57167421, gi|...

General Information:
Name(s) found: gi|57238617 [NCBI NR]
gi|57167421 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|57238617|ref|YP_179748.1| bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein [Campylobacter jejuni RM1221] [NCBI NR]
  • gi|57167421|gb|AAW36200.1| phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase [Campylobacter jejuni RM1221] [NCBI NR]
  • phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase [Campylobacter jejuni RM1221] [nr-271106-contam.fasta]
    • Organism: Campylobacter jejuni RM1221
    Length: 207 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: histidine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: phosphoribosyl-ATP diphosphatase activity [ISSLink to PubMed article]
    phosphoribosyl-AMP cyclohydrolase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNFKELNEK IAWQKVDNLL PVIIQDAKTC EVLMLGFMNN EALEKSLESG KVVFFSRTKQ  60
   61 RLWMKGEESG NFLNIIDLSL DCDNDTLLIL ANPVGPTCHT GDISCFEKIS KNADFVFLAR 120
  121 LEKLINARKN ADENTSYTAK LFKSGTKRIA QKVGEEGVET ALAATVKDKE ELICEAADLM 180
  181 YHLSVLLADA NLSFSDVISK LKERHKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] PSI-BLAST 46.522879 Crystal structure of Methanobacterium thermoautotrophicum phosphoribosyl-AMP cyclohydrolase HisI
    2 View Details [112..207] PSI-BLAST 28.09691 Crystal structure of Phosphoribosyl-ATP pyrophosphohydrolase from Bacillus cereus. NESGC target BcR13.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoribosyl-AMP cyclohydrolase activity
    		•  4.150200144507 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  2.23740731288751 bayes_pls_golite062009
  • catalytic activity
    		•  1.39985329737364 bayes_pls_golite062009
  • cyclohydrolase activity
    		•  0.79104127517031 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.54834173729282 bayes_pls_golite062009
    2
    Term Confidence Notes
  • phosphoribosyl-ATP diphosphatase activity
    		•  3.7001994388833 bayes_pls_golite062009
  • phosphoribosyl-AMP cyclohydrolase activity
    		•  2.61820126109961 bayes_pls_golite062009
  • catalytic activity
    		•  1.00486703080234 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  0.72725441841528 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle