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Protein Overview: gi|83587948, gi|...

General Information:
Name(s) found: gi|83587948 [NCBI NR]
gi|194436449 [NCBI NR]
gi|194424481 [NCBI NR]
Description(s) found:
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  • gi|83587948|ref|ZP_00926574.1| COG1482: Phosphomannose isomerase [Escherichia coli 101-1] [NCBI NR]
  • gi|194436449|ref|ZP_03068550.1| mannose-6-phosphate isomerase, class I [Escherichia coli 101-1] [NCBI NR]
  • gi|194424481|gb|EDX40467.1| mannose-6-phosphate isomerase, class I [Escherichia coli 101-1] [NCBI NR]
  • COG1482: Phosphomannose isomerase [Escherichia coli 101-1] [nr-271106-contam.fasta]
    • Organism: Escherichia coli 101-1
    Length: 391 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKLINSVQN YAWGSKTALT ELYGMENPSS QPMAELWMGA HPKSSSRVQN AAGDIVSLRD  60
   61 VIESDKSTLL GEAVAKRFGE LPFLFKVLCA AQPLSIQVHP NKHNSEIGFA KENAAGIPMD 120
  121 AAERNYKDPN HKPELVFALT PFLAMNAFRE FSEIVSLLQP VAGAHPAIAH FLQQPDAERL 180
  181 SELFASLLNM QGEEKSRALA ILKSALDSQQ GEPWQTIRLI SEFYPEDSGL FSPLLLNVVK 240
  241 LNPGEAMFLF AETPHAYLQG VALEVMANSD NVLRAGLTPK YIDIPELVAN VKFEAKPANQ 300
  301 LLTQPVKQGA ELDFPIPVDD FAFSLHDLSD KETTISQQSA AILFCVEGDA TLWKGSQQLQ 360
  361 LKPGESAFIA ANESPVTVKG HGRLARVYNK L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..391] PSI-BLAST 92.69897 HUMAN RANTES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  1.86690435826277 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.64913898350018 bayes_pls_golite062009
  • DNA binding
    		•  1.57178406956273 bayes_pls_golite062009
  • binding
    		•  1.54596514444405 bayes_pls_golite062009
  • transcription factor activity
    		•  0.937392765385803 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.8581504516071 bayes_pls_golite062009
  • dTDP-4-dehydrorhamnose 3,5-epimerase activity
    		•  0.693650090282669 bayes_pls_golite062009
  • catalytic activity
    		•  0.401988496917198 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
    		•  0.353173877157675 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  0.348782780143283 bayes_pls_golite062009
  • protein binding
    		•  0.110960530780648 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle