YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: YD14_SCHPO

General Information:
Name(s) found: YD14_SCHPO [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • Uncharacterized protein C4G9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4G9.04c PE=3 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 638 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLVELDYLS ALEDLTFNSK PIIHTLTYIA QENEPYAISI VNAIEKHIQK CPPNCKLPAL  60
   61 YLLDSISKNL GAPYTYFFGL HLFSTFMSAY TVVEPRLRLK LDQLLATWKQ RPPNSSSLEP 120
  121 VFSPIVTAKI ENALLKYKST ILRHQSPLLA NTSISSFSAP IDANINSYSS FSDPASSYKP 180
  181 SLPSVPFGFQ HISGTSPSPG FITLDSLLSD VNRMIVTEQA RFIKNPYDNM AKKRFEILLQ 240
  241 LKNVLSSSAL PYDQLLAIKN QLAQLEKPAS PSTSSVATSA PSVPSALSSI SSTPFMKPSI 300
  301 PSTIPTIPSA YSASVSSQPP LTHSYVHPGP QSHKYSLSSG PPASLYNANA LTPEESSSID 360
  361 SLFANLQAAG LVPPSAGGKS QGPQASCTEA VSLTADIDLS KSSLATPRPK LSSLLYENYS 420
  421 NQCANCGRRY GNDPESRKEL DKHSDWHFRI NKRIRESSLH GINRCWFVME EEWVNSKEEE 480
  481 DLITETAQEI EEQRQKQMES VRSQYVLTPL DPIAASEPCP ICQEKFQSVW HEEAEVWVFM 540
  541 NAVEEEGRIF HATCLQEVRP SENKHSNTNT STQNLAEAAV SSNIKNATGD ASKDSQPDVQ 600
  601 NLLQGIDIQS ILQALGKRKE RDDSMDSMSS KVIKQESK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] PSI-BLAST 43.39794 The RNA polymerase II CTD in mRNA processing: beta-turn recognition and beta-spiral model
    2 View Details [135..299] PSI-BLAST 3.045757 Sec24
    3 View Details [300..402] deduced N/A No confident structure predictions are available.
    4 View Details [403..566] FFAS03 2.1 No description for 2i13A was found.
    5 View Details [567..638] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  3.44539235794744 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.34092044533955 bayes_pls_golite062009
  • protein binding
    		•  1.97365365208963 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.74252996786746 bayes_pls_golite062009
  • DNA binding
    		•  1.73786982174918 bayes_pls_golite062009
  • transcription factor activity
    		•  1.0565013251721 bayes_pls_golite062009
  • clathrin binding
    		•  0.196939581490181 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.66

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle