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Protein Overview: Or98b-PA

General Information:
Name(s) found: Or98b-PA / FBpp0084657 [FlyBase]
Description(s) found:
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  • gi|92090622|sp|Q9VAW0.3|OR98B_DROME RecName: Full=Putative odorant receptor 98b [NCBI NR]
  • gi|78707529|ref|NP_524540.3| odorant receptor 98b [Drosophila melanogaster] [NCBI NR]
  • gi|71854592|gb|AAF56788.3| odorant receptor 98b [Drosophila melanogaster] [NCBI NR]
  • Putative odorant receptor 98b OS=Drosophila melanogaster GN=Or98b PE=1 SV=3 [Swiss-Prot]
  • The gene Odorant receptor 98b is referred to in FlyBase by the symbol Dmel\Or98b (CG1867, FBgn0039582). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:24177964..24179224. It has the cytological map location 98C4. Based on sequence similarity, it is predicted to have molecular function</span>: olfactory receptor activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of smell. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • type=protein; loc=3R:join(24177964..24178273,24178329..24178514,24178567..24179224); ID=FBpp0084657; name=Or98b-PA; parent=FBgn0039582,FBtr0085288; dbxref=FlyBase:FBpp0084657,GB_protein:AAF56788.2,FlyBase_Annotation_IDs:CG1867-PA,GB_protein:AAF56788.3,REF [fly-100309-contam.fasta]
  • Putative odorant receptor 98b [nr-271106-contam.fasta]
  • CG1867-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant receptor 98b CG1867-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(24177964..24178273,24178329..24178514,24178567..24179224); ID=FBpp0084657; name=Or98b-PA; parent=FBgn0039582,FBtr0085288; dbxref=FlyBase:FBpp0084657,GB_protein:AAF56788.2,FlyBase_Annotation_IDs:CG1867-PA,GB_protein:AAF56788.3,REFSEQ:NP_524540,GB_protein:AAF56788; MD5=a521e9c2ced0e1b5964be8d34c59ed6f; length=384; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(24177964..24178273,24178329..24178514,24178567..24179224); ID=FBpp0084657; name=Or98b-PA; parent=FBgn0039582,FBtr0085288; dbxref=FlyBase:FBpp0084657,GB_protein:AAF56788.2,FlyBase_Annotation_IDs:CG1867-PA,GB_protein:AAF56788.3,REFSEQ:NP_524540,GB_protein:AAF56788; MD5=a521e9c2ced0e1b5964be8d34c59ed6f; length=384; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3R:join(24177964..24178273,24178329..24178514,24178567..24179224); ID=FBpp0084657; name=Or98b-PA; parent=FBgn0039582,FBtr0085288; dbxref=FlyBase:FBpp0084657,GB_protein:AAF56788.2,FlyBase_Annotation_IDs:CG1867-PA,GB_protein:AAF56788.3,REFSEQ:NP_524540,GB_protein:AAF56788,FlyMine:FBpp0084657,modMine:FBpp0084657; MD5=a521e9c2ced0e1b5964be8d34c59ed6f; length=384; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(28352242..28352551,28352607..28352792,28352845..28353502); ID=FBpp0084657; name=Or98b-PA; parent=FBgn0039582,FBtr0085288; dbxref=FlyBase:FBpp0084657,GB_protein:AAF56788.2,FlyBase_Annotation_IDs:CG1867-PA,GB_protein:AAF56788.3,REFSEQ:NP_524540,GB_protein:AAF56788,FlyMine:FBpp0084657,modMine:FBpp0084657; MD5=a521e9c2ced0e1b5964be8d34c59ed6f; length=384; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
    • Organism: Drosophila melanogaster
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [ISS]
    Biological Process: sensory perception of smell [IEA][ISS]
    Molecular Function: odorant binding [IEA]
    olfactory receptor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTDKFLRLQ SALFRLLGLE LLHEQDVGHR YPWRSICCIL SVASFMPLTI AFGLQNVQNV  60
   61 EQLTDSLCSV LVDLLALCKI GLFLWLYKDF KFLIGQFYCV LQTETHTAVA EMIVTRESRR 120
  121 DQFISAMYAY CFITAGLSAC LMSPLSMLIS YQRTGELQPK FPFPSVYPWD NMKLSNYIIS 180
  181 YFWNVCAALG VALPTVCVDT LFCSLSHNLC ALFQIARHKM MHFEGRNTKE THENLKHVFQ 240
  241 LYALCLNLGH FLNEYFRPLI CQFVAASLHL CVLCYQLSAN ILQPALLFYA AFTAAVVGQV 300
  301 SIYCFCGSSI HSECQLFGQA IYESSWPHLL QENLQLVSSL KIAMMRSSLG CPIDGYFFEA 360
  361 NRETLITVSK AFIKVSKKTP QVND

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] MSA 1.258995 View MSA. No confident structure predictions are available.
    2 View Details [106..208] deduced N/A No confident structure predictions are available.
    3 View Details [209..384] MSA 9.278993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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