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View Structure Prediction Details

Protein: Or98b-PA
Organism: Drosophila melanogaster
Length: 384 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or98b-PA.

Description E-value Query
Range
Subject
Range
gi|54638166, gi|... - gi|54638166|gb|EAL27568.1| GA15044-PA [Drosophila pseudoobscura], gi|125774341|ref|XP_001358429.1| G...
206.0 [0..1] [381..1]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTDKFLRLQ SALFRLLGLE LLHEQDVGHR YPWRSICCIL SVASFMPLTI AFGLQNVQNV  60
   61 EQLTDSLCSV LVDLLALCKI GLFLWLYKDF KFLIGQFYCV LQTET

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HTAVAEMIVT RESRRDQFIS AMYAYCFITA GLSACLMSPL SMLISYQRTG ELQPKFPFPS  60
   61 VYPWDNMKLS NYIISYFWNV CAALGVALPT VCVDTLFCSL SHN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [209-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LCALFQIARH KMMHFEGRNT KETHENLKHV FQLYALCLNL GHFLNEYFRP LICQFVAASL  60
   61 HLCVLCYQLS ANILQPALLF YAAFTAAVVG QVSIYCFCGS SIHSECQLFG QAIYESSWPH 120
  121 LLQENLQLVS SLKIAMMRSS LGCPIDGYFF EANRETLITV SKAFIKVSKK TPQVND

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle