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Protein Overview: ptr-12

General Information:
Name(s) found: ptr-12 / CE39592 [WormBase]
Description(s) found:
Found 11 descriptions.
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  • WBGene00004226 locus:ptr-12 status:Confirmed UniProt:Q2MGS3 protein_id:CCD68129.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 350 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    type II protein secretion system complex [IEALink to PubMed article]
    Biological Process: protein secretion by the type II secretion system [IEALink to PubMed article]
    Molecular Function: protein transporter activity [IEALink to PubMed article]
    hedgehog receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDLRVKYVI PNFYLANVFV RKPGDLTDGA RLQRLNQFVE EMEHLNGSWG SLGTNYFVRD  60
   61 FVNFQAAMVE EEEAEGGEEE ASIVKRGGID VNNLPMFLEW PEYLFWKGFV QFHSAENRTV 120
  121 LDRFFITFAI HGTNLQSWPA RGDALREWRN VVDKYSAEFG LSVFSDDGIY VDLIENMPTD 180
  181 AWQSAVATLA CMAFICFVFM YDVPTVMVAT SIIASIMTGI LGILSLTGTD LDPIVMSALI 240
  241 ISIGFSVDIP AHISYHYHTS PSDNGIRHRL HKTLSSVGFP ALQATVSTSL CVLSLKFSSI 300
  301 YMSCAFVKTM ITCMILCVFH ALVLLPCLFA IFHRIHSLFR VPKTSPIESK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 72.522879 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains; Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains; Multidrug efflux transporter AcrB transmembrane domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle