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Protein Overview: CE39603

General Information:
Name(s) found: CE39603 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00019803 status:Confirmed UniProt:Q2L6X5 protein_id:CCD68999.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 306 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: cation transport [IEALink to PubMed article]
    Molecular Function: cation transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTLTEEESD KAAEKEKRDL VWDSRITTLT IILNVSLIIA KSIVAYFSGS LAILASVVDS  60
   61 FMDITSGVVV WYACYKIEKM NKEQYPVGMR KLEPLTVVIV GMIMLFANFI VLERATVQTI 120
  121 EDKLDPRVDL TTLIVLCTGT ATKFCLFMIC RVRKSAACLV LAIDQRNDCL TNIVALLGAW 180
  181 IGQNWWKYAD PLGAFMVSGF IIVTWFLTIR EHIPYLIGRR ADQEFINRIT NISINHDQRI 240
  241 KALDTVHVYH FGEKFLVEVH AVFDEPAPLQ MAHDVAESLQ VKLEKLPFVE RAFVHCDYKF 300
  301 DGDEHV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..306] PSI-BLAST 54.69897 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  4.5307404935943 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.4634224995221 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.1916987544196 bayes_pls_golite062009
  • transporter activity
    		•  2.72282838578572 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.61155472577391 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.37288341875523 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  1.43383523050563 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.253156897715141 bayes_pls_golite062009
  • binding
    		•  0.112542057149574 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.0523266677042269 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle