Protein Overview: TYDP1_RAT

General Information:
Name(s) found:	TYDP1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|72255547\|ref\|NP_001026827.1\| tyrosyl-DNA phosphodiesterase 1 [Rattus norvegicus] [NCBI NR] gi\|71051114\|gb\|AAH98739.1\| Tyrosyl-DNA phosphodiesterase 1 [Rattus norvegicus] [NCBI NR] gi\|149025341\|gb\|EDL81708.1\| tyrosyl-DNA phosphodiesterase 1, isoform CRA_a [Rattus norvegicus] [NCBI NR] gi\|123781898\|sp\|Q4G056.1\|TYDP1_RAT RecName: Full=Tyrosyl-DNA phosphodiesterase 1; Short=Tyr-DNA phosphodiesterase 1 [NCBI NR] Tyrosyl-DNA phosphodiesterase 1 OS=Rattus norvegicus GN=Tdp1 PE=1 SV=1 [Swiss-Prot] Tax_Id=10116 Tyrosyl-DNA phosphodiesterase 1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tyrosyl-DNA phosphodiesterase 1 (Tyr-DNA phosphodiesterase 1) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] tyrosyl-DNA phosphodiesterase 1, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] tyrosyl-DNA phosphodiesterase 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tyrosyl-DNA phosphodiesterase 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Tdp1 Tyrosyl-DNA phosphodiesterase 1 [rat-ipi-250309-contam.fasta] Tyrosyl-DNA phosphodiesterase 1 OS=Rattus norvegicus GN=Tdp1 [011711_HMR.fasta] Tyrosyl-DNA phosphodiesterase 1 OS=Rattus norvegicus GN=Tdp1 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
Organism:	Rattus norvegicus
Length:	609 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IEA] cytoplasm [UNKNOWN][IEA] cellular_component [ND]
Biological Process:	single strand break repair [UNKNOWN][IEA] DNA repair [UNKNOWN] biological_process [ND] double-strand break repair [UNKNOWN][IEA]
Molecular Function:	protein binding [UNKNOWN][IEA] exonuclease activity [IEA] double-stranded DNA binding [UNKNOWN][IEA] phosphoric diester hydrolase activity [IEA] 3'-tyrosyl-DNA phosphodiesterase activity [UNKNOWN][IEA] molecular_function [ND] single-stranded DNA binding [UNKNOWN][IEA] hydrolase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQESSYGKW TISSSDDSED EKPKPVKPST SSGPQAGQGV SKEPTYTCSE ARKAAHKRQI  60
   61 SPVKFNNTDS VLPHKKQKMD SPEGLGWCLS SSDDEQQPDV TQQEQPKGVP PQEKKYAPSA 120
  121 NVTTAQKVED RSPPDSHRAQ RADEEYETSG EGQDIWDMLD KENPFQFYLT RVSGIKAKYN 180
  181 SKALHIKDIL SPLFGTLVSS AQFNYCFDVN WLIKQYPPEF RKKPILLVHG DKREAKADLH 240
  241 AQAKPYANIS LCQAKLDIAF GTHHTKMMLL LYEEGLRVVI HTSNLIREDW HQKTQGIWLS 300
  301 PLYPRIYQGN HTSGESSTHF KADLTSYLMA YNAPPLQEWI DIIQEHDLSE TNVYLIGSTP 360
  361 GRFQGSHKDN WGHFRLRKLL QAHAPSAPRG ECWPVVGQFS SIGSLGPDES KWLCSEFKES 420
  421 LLAVREEGRT PGRSAVPLHL IYPSVENVRT SLEGYPAGGS LPYGIQTAEK QRWLHPYFHK 480
  481 WSAETSGRSN AMPHIKTYMR PSPDFSKLAW FLVTSANLSK AAWGALEKNG AQLMIRSYEL 540
  541 GVLFLPSAFG LDTFKVKQKF FSSSSEPMAS FPVPYDLPPE LYGSKDRPWI WNIPYVKAPD 600
  601 THGNMWVPS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.95

Protein Overview: TYDP1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: