Protein Overview: gi|115481800, gi...

General Information:
Name(s) found:	gi\|78708489 [NCBI NR] gi\|115481800 [NCBI NR] gi\|113639102 [NCBI NR]
Description(s) found: Found 5 descriptions. SHOW ALL	gi\|78708489\|gb\|ABB47464.1\| Cytidylyltransferase family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR] gi\|115481800\|ref\|NP_001064493.1\| Os10g0387000 [Oryza sativa (japonica cultivar-group)] [NCBI NR] gi\|113639102\|dbj\|BAF26407.1\| Os10g0387000 [Oryza sativa Japonica Group] [NCBI NR]
Organism:	Oryza sativa Japonica Group
Length:	425 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMGLLAFES NQGLWNSGYY SQLFGIGGVM VTVAILWLST GYFGGIGAPF APYFWPYLGQ  60
   61 LPKKKERKRP VRVYMDGCFD LMHYGHANAL RQAKLLGDQL VVGVVSDEEI VANKGPPVLS 120
  121 MEERLTLVSG LKWVDEVIPN APYEITEEFM NTLFNKYNID YIIHGDDPCL LPDGTDAYAL 180
  181 AKKVGRYKQI KRTEGVSSTD IVGRILLTFK QKEAGSMETT TDANQNTGAT CDKVKSQLSN 240
  241 FLPTSRRIMQ FSNGQAPSPG ARVVYIDGAF DLFHAGHVEI LRSARQLGDF LLVGVHDDQA 300
  301 IRDRRGYRPI MHLHERTLSV LACRYVDEVI IGAPWEVSRD MITTFNISLV VHGTVTEGSS 360
  361 VVGIDSYAVP KSMGIFQTIT STKPITTVSV ATRIIDNHEA YKKRNLKKKA SEDRYYTQKK 420
  421 FVSGD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..68]	MSA	1.235991	View MSA. No confident structure predictions are available.
2	View Details	[69..258]	PSI-BLAST	32.0	CTP:glycerol-3-phosphate cytidylyltransferase
3	View Details	[259..336]	FFAS03	4.4	No description for 2b7lA was found.
4	View Details	[337..425]	PSI-BLAST	32.221849	Phosphopantetheine adenylyltransferase

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

Term	Confidence	Notes
ligase activity, forming carbon-oxygen bonds	3.78648093277891	bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds	3.78648093277891	bayes_pls_golite062009
aminoacyl-tRNA ligase activity	3.77519125450118	bayes_pls_golite062009
ligase activity	2.69963581983481	bayes_pls_golite062009
catalytic activity	2.37674226834122	bayes_pls_golite062009
ethanolamine-phosphate cytidylyltransferase activity	2.31031486896772	bayes_pls_golite062009
glutamate-tRNA ligase activity	0.993808666373194	bayes_pls_golite062009
nucleic acid binding	0.911644628339304	bayes_pls_golite062009
acid-amino acid ligase activity	0.716914478068664	bayes_pls_golite062009
binding	0.520077014845626	bayes_pls_golite062009
nucleotidyltransferase activity	0.427749234863188	bayes_pls_golite062009
methionine-tRNA ligase activity	0.376417381080717	bayes_pls_golite062009
tyrosine-tRNA ligase activity	0.257183459378457	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.097721445469396	bayes_pls_golite062009

3

No functions predicted.

4

Term	Confidence	Notes
ligase activity, forming carbon-oxygen bonds	3.78648093277891	bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds	3.78648093277891	bayes_pls_golite062009
aminoacyl-tRNA ligase activity	3.77519125450118	bayes_pls_golite062009
ligase activity	2.69963581983481	bayes_pls_golite062009
catalytic activity	2.37674226834122	bayes_pls_golite062009
ethanolamine-phosphate cytidylyltransferase activity	2.31031486896772	bayes_pls_golite062009
glutamate-tRNA ligase activity	0.993808666373194	bayes_pls_golite062009
nucleic acid binding	0.911644628339304	bayes_pls_golite062009
acid-amino acid ligase activity	0.716914478068664	bayes_pls_golite062009
binding	0.520077014845626	bayes_pls_golite062009
nucleotidyltransferase activity	0.427749234863188	bayes_pls_golite062009
methionine-tRNA ligase activity	0.376417381080717	bayes_pls_golite062009
tyrosine-tRNA ligase activity	0.257183459378457	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.097721445469396	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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