| Protein: | gi|115481800, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 425 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115481800, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
380.0 | [0..3] | [425..1] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MMMGLLAFES NQGLWNSGYY SQLFGIGGVM VTVAILWLST GYFGGIGAPF APYFWPYLGQ 60
61 LPKKKERK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [69-258] |
1 11 21 31 41 51
| | | | | |
1 RPVRVYMDGC FDLMHYGHAN ALRQAKLLGD QLVVGVVSDE EIVANKGPPV LSMEERLTLV 60
61 SGLKWVDEVI PNAPYEITEE FMNTLFNKYN IDYIIHGDDP CLLPDGTDAY ALAKKVGRYK 120
121 QIKRTEGVSS TDIVGRILLT FKQKEAGSME TTTDANQNTG ATCDKVKSQL SNFLPTSRRI 180
181 MQFSNGQAPS
|
| Detection Method: | |
| Confidence: | 32.0 |
| Match: | 1cozA |
| Description: | CTP:glycerol-3-phosphate cytidylyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming carbon-oxygen bonds | 3.78648093277891 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.78648093277891 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 3.77519125450118 | bayes_pls_golite062009 |
| ligase activity | 2.69963581983481 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| ethanolamine-phosphate cytidylyltransferase activity | 2.31031486896772 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 0.993808666373194 | bayes_pls_golite062009 |
| nucleic acid binding | 0.911644628339304 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.716914478068664 | bayes_pls_golite062009 |
| binding | 0.520077014845626 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.427749234863188 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 0.376417381080717 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 0.257183459378457 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.097721445469396 | bayes_pls_golite062009 |
|
Region A: Residues: [259-336] |
1 11 21 31 41 51
| | | | | |
1 PGARVVYIDG AFDLFHAGHV EILRSARQLG DFLLVGVHDD QAIRDRRGYR PIMHLHERTL 60
61 SVLACRYVDE VIIGAPWE
|
| Detection Method: | |
| Confidence: | 4.4 |
| Match: | 2b7lA |
| Description: | No description for 2b7lA was found. |
|
Region A: Residues: [337-425] |
1 11 21 31 41 51
| | | | | |
1 VSRDMITTFN ISLVVHGTVT EGSSVVGIDS YAVPKSMGIF QTITSTKPIT TVSVATRIID 60
61 NHEAYKKRNL KKKASEDRYY TQKKFVSGD
|
| Detection Method: | |
| Confidence: | 32.221849 |
| Match: | 1qjcA |
| Description: | Phosphopantetheine adenylyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming carbon-oxygen bonds | 3.78648093277891 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.78648093277891 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 3.77519125450118 | bayes_pls_golite062009 |
| ligase activity | 2.69963581983481 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| ethanolamine-phosphate cytidylyltransferase activity | 2.31031486896772 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 0.993808666373194 | bayes_pls_golite062009 |
| nucleic acid binding | 0.911644628339304 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.716914478068664 | bayes_pls_golite062009 |
| binding | 0.520077014845626 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.427749234863188 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 0.376417381080717 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 0.257183459378457 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.097721445469396 | bayes_pls_golite062009 |
