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Protein Overview: taf-5

General Information:
Name(s) found: taf-5 / CE39361 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00006386 locus:taf-5 status:Confirmed UniProt:G5EF68 protein_id:CAB03035.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 648 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article][IEALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    transcription [TASLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gastrulation with mouth forming first [IMPLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    regulation of transcription [IEALink to PubMed article]
    Molecular Function: sugar binding [IEALink to PubMed article]
    transcription regulator activity [IEALink to PubMed article][TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSENSSSHS ISSPQMFQNT HNNSAMEDNL LSRPMNNESL QMIIGYLRRN GLTETEELLT  60
   61 REAGPVLRVE GSNGLPPEEA ISVEFDTFVQ HANDCTDVVQ AEFSQLLFPI FAHSYIALIE 120
  121 KHAATARIFF NRFKIFIPEC FSEFVYQLSL IEDAMTLRAN EHVHILRENK FLVRLSRPTL 180
  181 KHLESIQTRV IGVKNIIAKH ICIENADEVS TNRTTIETQM GGILGVTSKS DKRHKMMFSV 240
  241 LKDELMQNIE KRKTKGKDWK DMGKKMQTHC PQADRIPLPP ISEHLREERR NWLRDVGKMA 300
  301 IISAESPVSI CMYTTVNAPI GVASCDFTDD SSLIAMGLSD SSIVMNAMDP MNKMKKLRDM 360
  361 EFLDKIDIET ADNVQSQMFD LQGSTTSVRY TGHGGPVFSV NFSPDRRLLI SSAGDRTVRL 420
  421 WSMETQRNAV IYRTPAVVWQ AQFCSRGYYF ATASADKTAA MWSTDRMHPL RIFADPYGDV 480
  481 GCIDYHPNCN YIAGGSDDRY VRVWDVCSGT RVRIFSGHKA SIIAVKFSPC GRYIVSLDAI 540
  541 GNLMIWDLAY QRLVAAEITE QAGTKGSITF SRDGGVFAVS HGNSSIQLYS LDTLIGTVLA 600
  601 AGQNDSYIEP KVNLDGFNIG SYATKETAVI GLHFTRRNLL LGFGCFGQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] PSI-BLAST 24.0 Structure of the apoptotic protease-activating factor 1 bound to ADP
    2 View Details [209..295] deduced N/A No confident structure predictions are available.
    3 View Details [296..648] PSI-BLAST 74.39794 No description for 2h9lA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle