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Protein Overview: gi|56554498

General Information:
Name(s) found: gi|56554498 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|56554498|pdb|1XDZ|A Chain A, Crystal Structure Of Gram_positive Bacillus Subtilis Glucose Inhibited Division Protein B (Gidb), Structural Genomics, Mcsg [NCBI NR]
    • Organism: Bacillus subtilis
    Length: 240 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NMNIEEFTSG LAEKGISLSP RQLEQFELYY DMLVEWNEKI NLTSITEKKE VYLKHFYDSI  60
   61 TAAFYVDFNQ VNTICDVGAG AGFPSLPIKI CFPHLHVTIV DSLNKRITFL EKLSEALQLE 120
  121 NTTFCHDRAE TFGQRKDVRE SYDIVTARAV ARLSVLSELC LPLVKKNGLF VALKAASAEE 180
  181 ELNAGKKAIT TLGGELENIH SFKLPIEESD RNIMVIRKIK NTPKKYPRKP GTPNKSPIEG 240
  241

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|51247666, gi|... gi|56554498

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..240] PSI-BLAST 55.0 Crystal Structure of Gram_Positive Bacillus subtilis Glucose inhibited Division protein B (gidB), Structural genomics, MCSG

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • methyltransferase activity
    		•  4.15445027778357 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  4.09362182773099 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  4.07153733729662 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  3.39429041855776 bayes_pls_golite062009
  • RNA methyltransferase activity
    		•  3.07428840534971 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  3.0539218951403 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  3.01384869242051 bayes_pls_golite062009
  • transferase activity
    		•  2.22303238506686 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  1.90505369820945 bayes_pls_golite062009
  • rRNA (adenine) methyltransferase activity
    		•  1.83964463328968 bayes_pls_golite062009
  • rRNA (adenine-N6,N6-)-dimethyltransferase activity
    		•  1.75675289134467 bayes_pls_golite062009
  • DNA-methyltransferase activity
    		•  1.63765148226572 bayes_pls_golite062009
  • arginine N-methyltransferase activity
    		•  1.6030970825293 bayes_pls_golite062009
  • protein-arginine N-methyltransferase activity
    		•  1.6030970825293 bayes_pls_golite062009
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • tRNA methyltransferase activity
    		•  1.12859857407629 bayes_pls_golite062009
  • rRNA (guanine) methyltransferase activity
    		•  1.10713374933008 bayes_pls_golite062009
  • histone-arginine N-methyltransferase activity
    		•  1.05897361334523 bayes_pls_golite062009
  • site-specific DNA-methyltransferase (adenine-specific) activity
    		•  0.703178429468566 bayes_pls_golite062009
  • protein-arginine omega-N monomethyltransferase activity
    		•  0.639377525568296 bayes_pls_golite062009
  • O-methyltransferase activity
    		•  0.250946859465502 bayes_pls_golite062009
  • protein-arginine omega-N asymmetric methyltransferase activity
    		•  0.130104080746388 bayes_pls_golite062009
  • histone methyltransferase activity (H4-R3 specific)
    		•  0.130042730841119 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle