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Protein Overview: CE39427

General Information:
Name(s) found: CE39427 [WormBase]
Description(s) found:
Found 11 descriptions.
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  • WBGene00022419 status:Confirmed UniProt:Q8MXR9 protein_id:CCD71593.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 332 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: nuclear mRNA splicing, via spliceosome [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLAMKRSNS ETRPLPRIEY GRSPSREKMT DLRDELFHAK KKVASYETDL KKLSTEMQRL  60
   61 RRDAEKRETF LERIVTAQYH PTELNDTNLA RTLTSIKRKE MAKENLIDIQ AKELERLRSL 120
  121 LKDSHIPLGS KHPTETMTVS VAKDSELDVD NEDYSDYPEE PDLVETAGHS ERDEEYDEVF 180
  181 EEVHNRKLDK SRVKTASKER NELAKKYAEQ NAKLKLKLKE VKNNYASMLE KNKKKGEEFI 240
  241 KQSENSKAVV EKTVQISTVL DSLQKEREDL SEIRKKNEQK IEGLSQELIE AYGEIDALKM 300
  301 NNEKLQEHLG DLEQRVGHLK IQPDYESLPP LK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..332] PSI-BLAST 23.045757 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle