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View Structure Prediction Details

Protein: CE39427
Organism: Caenorhabditis elegans
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39427.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
158.0 [0..1] [325..1895]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLAMKRSNS ETRPLPRIEY GRSPSREKMT DLRDELFHAK KKVASYETDL KKLSTEMQRL  60
   61 RRDAEKRETF LERIVTAQYH PTELNDTNLA RTLTSIKRKE MAKENLIDIQ AKELERLRSL 120
  121 LKDSHIPLGS KHPTETMTVS VAKDSELDVD NEDYSDYPEE PDLVETAGHS ERDEEYDEVF 180
  181 EEVHNRKLDK SRVKTASKER NELAKKYAEQ NAKLKLKLKE VKNNYASMLE KNKKKGEEFI 240
  241 KQSENSKAVV EKTVQISTVL DSLQKEREDL SEIRKKNEQK IEGLSQELIE AYGEIDALKM 300
  301 NNEKLQEHLG DLEQRVGHLK IQPDYESLPP LK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.045757
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle