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Protein Overview: TRPC_CAMJR

General Information:
Name(s) found: TRPC_CAMJR [Swiss-Prot]
Description(s) found:
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  • gi|73622063|sp|Q5HVR3.1|TRPC_CAMJR RecName: Full=Indole-3-glycerol phosphate synthase; Short=IGPS [NCBI NR]
  • gi|57238297|ref|YP_178622.1| indole-3-glycerol phosphate synthase [Campylobacter jejuni RM1221] [NCBI NR]
  • gi|57167101|gb|AAW35880.1| indole-3-glycerol phosphate synthase [Campylobacter jejuni RM1221] [NCBI NR]
  • Indole-3-glycerol phosphate synthase OS=Campylobacter jejuni (strain RM1221) GN=trpC PE=3 SV=1 [Swiss-Prot]
  • indole-3-glycerol phosphate synthase [Campylobacter jejuni RM1221] [nr-271106-contam.fasta]
  • Indole-3-glycerol phosphate synthase (IGPS) [nr-271106-contam.fasta]
    • Organism: Campylobacter jejuni RM1221
    Length: 258 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tryptophan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: indole-3-glycerol-phosphate synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILDKIFEKT KEDLKERKLK LPYDMLGRSL ASNPFFPKDV IKALKRVEKE VKIIAEVKKA  60
   61 SPSKGVIRED FDPLSIALNY EKNKAAAISV LTEPHFFKGS LEYLSLIRRY TQIPLLRKDF 120
  121 IFDEYQILEA LVYGADFVLL IAKMLSMKEL KKLLEFARHL GLEALVEIHD KEDLSKAIFA 180
  181 GADIIGINHR NLEDFTMDMS LCEKLIPQIP NSKIIIAESG LENKEFLEHL QNLGVDAFLI 240
  241 GEYFMREKDE GKALKALL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..258] PSI-BLAST 47.522879 Indole-3-glycerophosphate synthase, IPGS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • tryptophan synthase activity
    		•  3.15663465352598 bayes_pls_golite062009
  • indole-3-glycerol-phosphate synthase activity
    		•  3.12120866545322 bayes_pls_golite062009
  • catalytic activity
    		•  2.81275055404078 bayes_pls_golite062009
  • phosphoribosylanthranilate isomerase activity
    		•  2.655130814615 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  2.44001937916931 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.80978905789979 bayes_pls_golite062009
  • lyase activity
    		•  0.9228652996943 bayes_pls_golite062009
  • imidazoleglycerol-phosphate synthase activity
    		•  0.82314869965119 bayes_pls_golite062009
  • 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity
    		•  0.302746738903759 bayes_pls_golite062009
  • isomerase activity
    		•  0.14149405165663 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle