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Protein Overview: DCL4_ARATH

General Information:
Name(s) found: DCL4_ARATH [Swiss-Prot]
Description(s) found:
Found 4 descriptions.
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  • Dicer-like protein 4 OS=Arabidopsis thaliana GN=DCL4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1589 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: virus induced gene silencing [IGI]
    [NOT]production of miRNAs involved in gene silencing by miRNA [IGI]
    vegetative phase change [IMP]
    defense response to virus [IMP]
    production of lsiRNA involved in RNA interference [IMP]
    RNA processing [ISS]
    maintenance of DNA methylation [IMP]
    production of siRNA involved in RNA interference [IMP]
    production of ta-siRNAs involved in RNA interference [IMP]
    Molecular Function: RNA binding [ISS]
    ribonuclease III activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDEVDLSLT IPSKLLGKRD REQKNCEEEK NKNKKAKKQQ KDPILLHTSA ATHKFLPPPL  60
   61 TMPYSEIGDD LRSLDFDHAD VSSDLHLTSS SSVSSFSSSS SSLFSAAGTD DPSPKMEKDP 120
  121 RKIARRYQVE LCKKATEENV IVYLGTGCGK THIAVMLIYE LGHLVLSPKK SVCIFLAPTV 180
  181 ALVEQQAKVI ADSVNFKVAI HCGGKRIVKS HSEWEREIAA NEVLVMTPQI LLHNLQHCFI 240
  241 KMECISLLIF DECHHAQQQS NHPYAEIMKV FYKSESLQRP RIFGMTASPV VGKDGPPLDS 300
  301 FTYFSGSFQS ENLSKSINSL ENLLNAKVYS VESNVQLDGF VSSPLVKVYY YRSALSDASQ 360
  361 STIRYENMLE DIKQRRANVY CLRFLEAAKI QLNSDHNVQD EPVGKNPKSK ICDTYLSMAA 420
  421 EALSSGVAKD ENASDLLSLA ALKEPLFSRK LVQLIKILSV FRLEPHMKCI IFVNRIVTAR 480
  481 TLSCILNNLE LLRSWKSDFL VGLSSGLKSM SRRSMETILK RFQSKELNLL VATKVGEEGL 540
  541 DIQTCCLVIR YDLPETVTSF IQSRGRARMP QSEYAFLVDS GNEKEMDLIE NFKVNEDRMN 600
  601 LEITYRSSEE TCPRLDEELY KVHETGACIS GGSSISLLYK YCSRLPHDEF FQPKPEFQFK 660
  661 PVDEFGGTIC RITLPANAPI SEIESSLLPS TEAAKKDACL KAVHELHNLG VLNDFLLPDS 720
  721 KDEIEDELSD DEFDFDNIKG EGCSRGDLYE MRVPVLFKQK WDPSTSCVNL HSYYIMFVPH 780
  781 PADRIYKKFG FFMKSPLPVE AETMDIDLHL AHQRSVSVKI FPSGVTEFDN DEIRLAELFQ 840
  841 EIALKVLFER GELIPDFVPL ELQDSSRTSK STFYLLLPLC LHDGESVISV DWVTIRNCLS 900
  901 SPIFKTPSVL VEDIFPPSGS HLKLANGCWN IDDVKNSLVF TTYSKQFYFV ADICHGRNGF 960
  961 SPVKESSTKS HVESIYKLTE PQELDEYFIE IPPELSHLKI KGLSKDIGSS LSLLPSIMHR1020
 1021 MENLLVAIEL KHVLSASIPE IAEVSGHRVL EALTTEKCHE RLSLERLEVL GDAFLKFAVS1080
 1081 RHLFLHHDSL DEGELTRRRS NVYIRDQALD PTQFFAFGHP CRVTCDEVAS KEVHSLNRDL1140
 1141 GILESNTGEI RCSKGHHWLY KKTIADVVEA LVGAFLVDSG FKGAVKFLKW IGVNVDFESL1200
 1201 QVQDACIASR RYLPLTTRNN LETLENQLDY KFLHKGLLVQ AFIHPSYNRH GGGCYQRLEF1260
 1261 LGDAVLDYLM TSYFFTVFPK LKPGQLTDLR SLSVNNEALA NVAVSFSLKR FLFCESIYLH1320
 1321 EVIEDYTNFL ASSPLASGQS EGPRCPKISP IKELIELCQS YKWDREISAT KKDGAFTVEL1380
 1381 KVTKNGCCLT VSATGRNKRE GTKKAAQLMI TNLKAHENIT TSHPLEDVLK NGIRNEAKLI1440
 1441 GYNEDPIDVV DLVGLDVENL NILETFGGNS ERSSSYVIRR GLPQAPSKTE DRLPQKAIIK1500
 1501 AGGPSSKTAK SLLHETCVAN CWKPPHFECC EEEGPGHLKS FVYKVILEVE DAPNMTLECY1560
 1561 GEARATKKGA AEHAAQAAIW CLKHSGFLC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle