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Protein Overview: clec-236

General Information:
Name(s) found: clec-236 / CE38251 [WormBase]
Description(s) found:
Found 11 descriptions.
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  • WBGene00013495 locus:clec-236 status:Partially_confirmed UniProt:O62501 protein_id:CAB16539.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 556 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pronuclear migration [IMP]
    locomotion [IMP]
    morphogenesis of an epithelium [IMP]
    nematode larval development [IMP]
    embryonic development ending in birth or egg hatching [IMP]
    receptor-mediated endocytosis [IMP]
    growth [IMP]
    Molecular Function: sugar binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSINSIAAG TITSCWSDVF SKQSRKRSMI LAFILTLLVV PDGTNGMIFS EFLKNYRDLV  60
   61 DISSLKTCWM LGGDGIQQVN PKNEQKGYQC TVKLRAWSTN EKDVKDACMS RIPYYITHAK 120
  121 PENAETSCTF QMNLHCDDNY WQIHGRCYRV FDGKYTFEEA QQIKLNILLN DMEGIYDAWV 180
  181 TVPNIKDYFT NGQGEAEVYV QDSAYKYDVR PGSIMMDRLE GRHQVLCEYK PAMTMAEMFY 240
  241 MAKLYSEIYP IHVYTHGAIF TSASYLTVTQ RSLIKNTGGP TQYGDEIEKF DTSELNEKCK 300
  301 LLGNILNVDS IPMVPTENEQ NYVKHLLTDH QFYMTSGFKS DGCGRGDYRT QQDGNTSTSF 360
  361 DSIGSNDEYC HAHRNGRYPT MAAMRAPAIC AMHEFSWSHG DCDPKPEWAE EMLVYNRTSE 420
  421 SVFCHYVDET EKITYYEAKA RCNSFGAELT GFDSRDEWVA VSKTLKTCHH WTGGITKYKS 480
  481 YNVPEIIWDA GVATNTDYFT DVYFQTTLPD EHLSLLWSEA HVHPTYRNYM YMCTICGKAA 540
  541 KLVRSEGKVY GLKTTG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] PSI-BLAST 7.522879 NMR structure of the human NOTCH-1 ligand binding region
    2 View Details [136..333] PSI-BLAST 12.221849 Snake coagglutinin alpha chain
    3 View Details [334..405] deduced N/A No confident structure predictions are available.
    4 View Details [406..556] PSI-BLAST 20.69897 No description for 2h2rA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.13629480035749 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.44675717945952 bayes_pls_golite062009
  • protein binding
    		•  0.059857076934361 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle