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Protein Overview: CE38216

General Information:
Name(s) found: CE38216 [WormBase]
Description(s) found:
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  • WBGene00011311 status:Confirmed UniProt:Q58AA7 protein_id:CAI70408.1 [WormBase]
  • gi|71994055|ref|NP_001022292.1| hypothetical protein T01B7.5 [Caenorhabditis elegans] [NCBI NR]
  • gi|61855390|emb|CAI70408.1| C. elegans protein T01B7.5b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • CE38216 WBGene00011311 status:Confirmed TR:Q58AA7 protein_id:CAI70408.1 [wormpep150.fasta]
  • 38216 WBGene00011311 status:Confirmed TR:Q58AA7 protein_id:CAI70408.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE38216 WBGene00011311 status:Confirmed UniProt:Q58AA7_CAEEL protein_id:CAI70408.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE38216 WBGene00011311 status:Confirmed UniProt:Q58AA7_CAEEL protein_id:CAI70408.1| [wormORF-contam.fasta]
  • Hypothetical protein T01B7.5b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • T01B7.5b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE38216 WBGene00011311 status:Confirmed UniProt:Q58AA7 protein_id:CAI70408.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Isoform of Q22046, Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_T01B7.5 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    small-subunit processome [IEALink to PubMed article]
    Biological Process: gonad development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    oviposition [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    rRNA processing [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]
    protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTAFLLNLR AKQFSNEKLD DPLVDIHPVV ESLKRLEKKI TECEDFLHSN SDHLDELKKW  60
   61 AESEPENMEE LISKVGDVQL TKKNFGAIMN NNLSTITSSD NTSIHPHFTP MDADEKRKAS 120
  121 DKVAKNREYA ERRGKKKAKT SKTKNRRKVH AIEKRVKSQI GNVRREMQKY SGETSGIRAS 180
  181 TIKSTKLIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] MSA 2.036986 View MSA. No confident structure predictions are available.
    2 View Details [109..189] Pfam 26.327902 No description for PF09368.1 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle