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View Structure Prediction Details

Protein: CE38216
Organism: Caenorhabditis elegans
Length: 189 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38216.

Description E-value Query
Range
Subject
Range
SAS10_MOUSE - Something about silencing protein 10 OS=Mus musculus GN=Utp3 PE=1 SV=1
176.0 [0..2] [187..274]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTAFLLNLR AKQFSNEKLD DPLVDIHPVV ESLKRLEKKI TECEDFLHSN SDHLDELKKW  60
   61 AESEPENMEE LISKVGDVQL TKKNFGAIMN NNLSTITSSD NTSIHPHF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [109-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPMDADEKRK ASDKVAKNRE YAERRGKKKA KTSKTKNRRK VHAIEKRVKS QIGNVRREMQ  60
   61 KYSGETSGIR ASTIKSTKLI A

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 26.327902
Match: PF09368.1
Description: No description for PF09368.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle