Protein Overview: CE39537

General Information:
Name(s) found:	CE39537 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00022647 status:Confirmed UniProt:Q2PJ91 protein_id:CCD66906.1 [WormBase] gi\|83921782\|gb\|ABC48238.1\| Hypothetical protein ZK54.1b [Caenorhabditis elegans] [NCBI NR] gi\|115533556\|ref\|NP_001041301.1\| hypothetical protein ZK54.1 [Caenorhabditis elegans] [NCBI NR] [wormpep130-phg-ecoli-orf-rand.fasta] CE39537 WBGene00022647 status:Confirmed UniProt:Q2PJ91_CAEEL protein_id:ABC48238.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] [wormORF-contam.fasta] CE39537 WBGene00022647 status:Confirmed UniProt:Q2PJ91_CAEEL protein_id:ABC48238.1\| [wormORF-contam.fasta] CE39537 WBGene00022647 status:Confirmed TR:Q2PJ91 protein_id:ABC48238.1 [wormpep160-contam.fasta] Hypothetical protein ZK54.1b [Caenorhabditis elegans] [nr-271106-contam.fasta] ZK54.1b [Caenorhabditis elegans] [nr-271106-contam.fasta] CE39537 WBGene00022647 status:Confirmed UniProt:Q2PJ91 protein_id:ABC48238.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] CE39537 WBGene00022647 status:Confirmed UniProt:Q2PJ91 protein_id:CCD66906.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] CE39537 WBGene00022647 locus:slc-17.1 status:Confirmed UniProt:Q2PJ91 protein_id:CCD66906.1 [wormpep246-ecoli-contam.fasta] Isoform of Q23514, SLC (SoLute Carrier) homolog OS=Caenorhabditis elegans GN=slc-17.1 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	474 amino acids
Gene Ontology:
Cellular Component:	integral to membrane [IEA]
Biological Process:	drug transport [IEA] glycerol-3-phosphate transport [IEA] phosphate transport [IEA] transport [IEA]
Molecular Function:	phosphate transmembrane transporter activity [IEA] glycerol-3-phosphate transmembrane transporter activity [IEA] transporter activity [IEA] drug transmembrane transporter activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAEPPPSRT LPYGTSETID DDEALESKRW KRRHVVAILA LLGFANIYAM RANLSIAIVE  60
   61 MTSGTERKVN GTTLHVLGDF ENWTPMTQGV VLSSFFYGYI VSQLPGGYLA YTHGAKTIFF 120
  121 AGTFGTAVFT LLTPPFARMG YGMLVFARFM EGLLEGVTYP AMHVIWSRWA PPMEQTKLAT 180
  181 FAFSGSYFGT VVAMPLSAYL GEHFGWPMIF WFFGALGVIW CMVWYKTVHD RPEDDPKIST 240
  241 SELALLQRDA VSQNHYIVPW AQILRSKPVW AVIVAHSAQN LGFYIMLTNL PKMLKDIAGY 300
  301 NVEKAGIASS LPYFLMGFQI ITGGQLCDYL RRDKHYDTLF VRKMACALGF IGQSVFLFLV 360
  361 MTTSNSLLLV LFFSISIGLG GICWCGFSVN HLDLAPQYAG HLMATSNTFA TIPGIFGPLL 420
  421 VGAIVQNGTI GEWNVIMYII ISAYLLGAAI FWKFADATLQ PWAAEHTSFV GQLE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
substrate-specific transmembrane transporter activity	5.46247398538901	bayes_pls_golite062009
ion transmembrane transporter activity	4.58978526526921	bayes_pls_golite062009
cation transmembrane transporter activity	4.31967711223954	bayes_pls_golite062009
transporter activity	4.09176719149278	bayes_pls_golite062009
anion transmembrane transporter activity	3.94605227012838	bayes_pls_golite062009
substrate-specific transporter activity	3.59744164024479	bayes_pls_golite062009
transmembrane transporter activity	3.5865018981083	bayes_pls_golite062009
sugar:hydrogen symporter activity	2.99050613058546	bayes_pls_golite062009
cation:sugar symporter activity	2.99050613058546	bayes_pls_golite062009
carbohydrate transmembrane transporter activity	2.62141276633776	bayes_pls_golite062009
hexose phosphate transmembrane transporter activity	2.6188895673796	bayes_pls_golite062009
glucose-6-phosphate transmembrane transporter activity	2.6188895673796	bayes_pls_golite062009
inorganic anion transmembrane transporter activity	2.52916479889426	bayes_pls_golite062009
sugar transmembrane transporter activity	2.47557586092261	bayes_pls_golite062009
organic acid transmembrane transporter activity	2.15783210522667	bayes_pls_golite062009
solute:hydrogen symporter activity	2.10485633822652	bayes_pls_golite062009
phosphate transmembrane transporter activity	1.78662033436109	bayes_pls_golite062009
monosaccharide transmembrane transporter activity	1.6904339767429	bayes_pls_golite062009
active transmembrane transporter activity	1.59419818573076	bayes_pls_golite062009
secondary active transmembrane transporter activity	1.22264637452409	bayes_pls_golite062009
binding	1.02928844080554	bayes_pls_golite062009
polyol transmembrane transporter activity	0.924836669821548	bayes_pls_golite062009
alcohol transmembrane transporter activity	0.924836669821548	bayes_pls_golite062009
glycerol transmembrane transporter activity	0.812001619402678	bayes_pls_golite062009
symporter activity	0.74591237387473	bayes_pls_golite062009
solute:cation symporter activity	0.74591237387473	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..474]	PSI-BLAST	42.522879	Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

Protein Overview: CE39537

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: