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Protein Overview: CE39144

General Information:
Name(s) found: CE39144 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00017241 locus:pcyt-1 status:Confirmed UniProt:Q3HKC4 protein_id:CCD67345.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 354 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    teichoic acid biosynthetic process [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    biosynthetic process [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: nucleotidyltransferase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    metal ion binding [IEALink to PubMed article]
    glycerol-3-phosphate cytidylyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQRKRTMDS PQEEDVEVKK KATEVEYVVR SLASDEPAPF SDEALAITTR EAVDYSKKIT  60
   61 LAMAEANEAG RPVRIYADGI YDLFHHGHAN QLRQVKKMFP NVYLIVGVCG DRDTHKYKGR 120
  121 TVTSEEERYD GVRHCRYVDE VYREAPWFCT VEFLKNLKVD FIAHDAIPYV APGEEDLYEK 180
  181 FRREGMFLET ERTEGVSTSD VVCRIIRDYD KYVRRNLQRG YSPKELNVGF LAASKYQIQN 240
  241 KVDSLKSKGI ELLSTWKSKS DDIIRDFIDT FHKDGGLNAF GGRLKGIMSM SRSPSPSPHE 300
  301 GSPTGIEHHL ETQDEEEEEE ALEEEKVVEQ KIVEKKEVVK KRSSRNKAKT PLEY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..57] MSA 3.513996 View MSA. No confident structure predictions are available.
    2 View Details [58..220] PSI-BLAST 32.69897 CTP:glycerol-3-phosphate cytidylyltransferase
    3 View Details [221..354] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.341914580073 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  0.290102533976514 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  0.290102533976514 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  0.279236768577427 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle